| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3790 |
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| Symbol | |
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| ID | 5106021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4178366 |
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| End bp | 4179622 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505045 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001189270 |
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| Protein GI | 146308805 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCCC AGTTTCCACG TCGCACCCTG GCCCTGCTTC CTCTATTGCT GTTGGCAGCC
TGCGCCCAAG CCCCAGCAGA AAGTCTTCCG CCAGCCGCAC CGGTTGCCGC ACCGCAGGTC
ACCGCCGAGA AACCTGCCCC CAGCTTTGCC GATTGGCGCC AGGCGCTGCG CAGCGAAGCA
GTGGCTGCCG GAATCGATGC CGCCCTGTTC GACCGCGTCT TCGCCGGCAT CACGCCTGAC
CCGAGCGTCA TCAAGGCCGA CAGCAGCCAA CCGGAATTTA CTCGCCCGGT ATGGGAGTAC
CTCGACGGCG CCGTATCGGC CAGCCGGATA GGCCGTGGAC GCGTGCTGCT GGCCCAGCAC
AATGCAGTGC TGCAGCGCAT CGAGCAGCGC TACGGCGTCG AGGCGCCGGT ACTGGTGGCG
ATCTGGGGTC TGGAGAGCAA CTTCGGCAGC AACATCGGCG GTCATAGCGT GATCCGCTCG
CTGTCCACCC TGGCCTTCGA AGGCCGCCGC CAGGCCTTCT GGCGCACCCA GTTGCTGGCC
GCCCTGCAGA TCCTGCAGAA CGGCGACATC AGCAGCGAGC GCATGATCGG CTCCTGGGCC
GGGGCCATGG GCCAGACCCA GTTCATGCCC ACCACCTACA ACCAGCACGC CGTGGATTTC
GATGGCGACG GCAAGCGCGA CCTGTGGAAC TCCTCGAGCG ATGCCCTGGC CTCGGCCGCC
CATTATCTGC AGGCGTCTGG CTGGCAGCGC GGTCAGCCCT GGGGCTTCGA GGTTCGTCTG
CCGAACGGCT TCGACTACGC CCTGGCCGAC CCCGAGCAGC GCCGCACATT GGCCGAATGG
GCCGAGCTGG GCGTACGACC GCTGGCACCG ACAGGGGCGG CGGCAAGCTC CCGAGCCAGC
CTGCAGTTGC CTGCCGGCCA TCGCGGTCCG GCCTTCCTGC TGCTGGACAA CTTCCGCAGC
ATCCTCAAGT ACAACAACTC CACCTCCTAT GCGCTGGCCA TCGGTCTGCT CGCCGACAAC
CTGCTGCGCC CCAGCGAGGT GCAGGGCCAA TGGCCGCGTG ACGAACGTCA GCTGGGCCGC
AGCGAACGCA TCGAACTGCA GGAGCTGCTG GCACAGAAGG GTTTCGACCC CGGTCCGGCC
GACGGCATCA TCGGCGCCAA TACACGCAAG GCCATCCGCG CCCTGCAGCT GCAGCTGAAC
TGGCCGGCCG ACGGCTATCC CAACACGCAA CTGCTGCAGC AACTGCGCGG CCGCTGA
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| Protein sequence | MPPQFPRRTL ALLPLLLLAA CAQAPAESLP PAAPVAAPQV TAEKPAPSFA DWRQALRSEA
VAAGIDAALF DRVFAGITPD PSVIKADSSQ PEFTRPVWEY LDGAVSASRI GRGRVLLAQH
NAVLQRIEQR YGVEAPVLVA IWGLESNFGS NIGGHSVIRS LSTLAFEGRR QAFWRTQLLA
ALQILQNGDI SSERMIGSWA GAMGQTQFMP TTYNQHAVDF DGDGKRDLWN SSSDALASAA
HYLQASGWQR GQPWGFEVRL PNGFDYALAD PEQRRTLAEW AELGVRPLAP TGAAASSRAS
LQLPAGHRGP AFLLLDNFRS ILKYNNSTSY ALAIGLLADN LLRPSEVQGQ WPRDERQLGR
SERIELQELL AQKGFDPGPA DGIIGANTRK AIRALQLQLN WPADGYPNTQ LLQQLRGR
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