Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3739 |
Symbol | |
ID | 5105734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4122654 |
End bp | 4125188 |
Gene Length | 2535 bp |
Protein Length | 844 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640504994 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_001189219 |
Protein GI | 146308754 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC TGCCCATCGA TGCCCTGTTA CCTGCCCTGC GCGATGCCTT GAGCGCCCGC CACGAAGTGG TGCTGGAGGC GCCGCCCGGC GCCGGCAAGA CCACTCGCGT GCCGCTGGCG CTGCTCGATG CGCCCTGGCT GGCCGGACAG ACCATCCTCA TGCTCGAACC ACGCCGGCTG GCCGCCCGCG CCGCCGCCGA GCGCCTGGCC AGCGAGCTGG GCGAACGGGT CGGCGAGACG GTGGGCTACC GCATTCGCCT GGACAGCAAG GTGGGGCCGA ACACGCGCAT TGAGGTGGTC ACCGAAGGCA TCCTCGCCCG CCGCCTGCAG GACGATCCGG CGCTGGAAGG CGTCGGCCTG GTGGTCTTCG ACGAATTCCA CGAGCGCAGC CTGGATGCCG ATCTGGCCCT GGCGCTGACC CTGAACGGGC GCGCCATGTT CCGCGGCGAA GGCAGCGGCG AGGCGCCGCT AAAGGTGCTG CTGATGTCCG CCACCCTGGA AGGGGAGCGT CTGGCGGCGC TGCTTGGTGA GGCGCCGGTG CTGCGCAGCG AAGGGCGCAT GTTTCCGGTG GATATTTGCT GGGGCGCGCC ATTTCAGCCA GGCGAGTGGA TCGAGCCGCG GGTGCTGCAG ACGGTGCAGC AGGCCCTGGC CGACGAGCCC GGCAGCCTGC TGGTGTTCCT GCCCGGGCAG GCCGAGATCC GCCGCGTCGC CGAGCAGCTG GGCGAGGCGC TGGCGGGGCG CGACGACATT CTGCTCTGCC CGCTGCATGG CGAGCTCGAT CTGGCCGCCC AGCGCGCCGC CATCGAGCCG GCGCCGGCGG GCACGCGCAA GGTGGTGCTG GCCACCAATA TTGCCGAGAC CAGCCTGACC ATCGACGGCG TGCGCGTGGT GGTGGATGCC GGCCTGGCGC GGGTGCCGCG CTTCGACCCA GCCAGTGGCA TGACCCGTCT CGATACCCAG CGCATCTCCC GGGCTTCCGC GACCCAGCGT GCCGGCCGCG CCGGGCGTCT GCAGCCGGGT GTGTGCTATC GGCTGTGGTC GCAGGCGCAG CACGAGCAGC TCAGCGCCTA TTCCGGTGCG GAAATCCTTG CGGCCGATCT GGCCGGGTTG GCCCTGCAAC TGCTGCGCTG GGGCGTGACG CCGCAGGAGC TGAGCTGGCT CGACGTGCCG CCGCCGGCTG CCTACGCGCA GGCGCTGGAT CTGCTCGGCC GCCTCGGCGC GCTGGACGAA CGTGGCGCGC TCAATGCCCA TGGCCAGGCC ATGGCCGAGC TGCCCAGCCA TCCACGCATC GCCCATCTGC TGCTGCGTGG CCAGGCGCTG GGCCTGGGCG CGCTGGCCTG CGATCTGGCC GCGCTGCTCT CCGAGCGCGA CATTCTGCGC GGCGGCGGCG CCGATCTGCA CAGTCGCCTG GCCCTGCTCA GCGGCGAAAG CCGCGCCACG CGCAGCGCTC AAGGCGGCGT GCAGCGCGCC CGGCAGCTGG CCAAGCAGTT TCAGGGGCTG CTCAAGGGGC GGCTGGTCAT TGGGGCGGTG AGCGACCCCG AGCACCCGCG CTGGCTCGGC TGTCTGCTGG CCTTCGCCTA CCCCGACCGC ATCGCCCAGC AGCGCCGCGC CGGCGGCGCC GACTACCGCC TGGCCAACGG CCGCGCCGCG CAGTTCGCTG AGGCCGATGC GCTGATGAAG CACGAATGGC TGGTGGTGGC CGACCTGGGT AGCCGTCAGG GTCAGCGCGA GGAGCGCATC TATCTCGCCG CCGATCTCGA CCCGGCGCTG TTCGAGCGCG AACTGGCCGA ACAGGTCACG ACGCTGGAGG TGCTCGACTG GGACGAGCGC GAAGGCGTGC TGCGCGCCGA ACGTCAGCGC AAGGTGGGCG AACTGGTGCT GGAGCGCCAG GCACTGGCGG CGCTGGACGA GGACACGCGC AGCCGCGCCC TGGTCGGCCT GGTGCGACGC AAGGGCCTGG AGCTGCTGCC CTGGACGCCC GAACTGCGTC AGTGGCAGGC ACGCGTGGCG CTGCTACGCG AGCTCGATTT GCAGCAGCAC GGGCAGAGCG AATGGCCGGA CCTGTCCGAT GCCGCGCTAT TGGCCAGCCT CGAGCAGTGG CTGGCGCCGT TTCTGGGCAA GGTCAATCGC CTCAGCCACT TCGCCAATCT CGACCTGCCG GCGATCCTGC AGACGCTGCT GCCCTGGCCG CTGCCGCAAC GTCTCGACGA GCTGGCGCCG CGCACGCTGA GCGTGCCGTC CGGCTCGCGC ATCGCCATCG ACTACACGGA AAACCCGCCG GTGCTCGCCG TGCGCCTGCA GGAGCTGTTC GGTCTGGCCG CCACGCCGCG CATCGCCGGC GGCCGCCTGG GCCTCAAGCT GCACCTGCTG TCGCCGGCGC GCCGGCCGGT GCAGGTCACC CAGGATCTGG CCAGCTTCTG GGCCAACACC TACCTGGAGG TGAAGAAGGA CCTGAAGGGG CGGTATCCCA AGCACTACTG GCCGGACGAC CCGCTGATCG CCGAACCCAC GGCGCGCGCC AAACCCCGCA AATGA
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Protein sequence | MNALPIDALL PALRDALSAR HEVVLEAPPG AGKTTRVPLA LLDAPWLAGQ TILMLEPRRL AARAAAERLA SELGERVGET VGYRIRLDSK VGPNTRIEVV TEGILARRLQ DDPALEGVGL VVFDEFHERS LDADLALALT LNGRAMFRGE GSGEAPLKVL LMSATLEGER LAALLGEAPV LRSEGRMFPV DICWGAPFQP GEWIEPRVLQ TVQQALADEP GSLLVFLPGQ AEIRRVAEQL GEALAGRDDI LLCPLHGELD LAAQRAAIEP APAGTRKVVL ATNIAETSLT IDGVRVVVDA GLARVPRFDP ASGMTRLDTQ RISRASATQR AGRAGRLQPG VCYRLWSQAQ HEQLSAYSGA EILAADLAGL ALQLLRWGVT PQELSWLDVP PPAAYAQALD LLGRLGALDE RGALNAHGQA MAELPSHPRI AHLLLRGQAL GLGALACDLA ALLSERDILR GGGADLHSRL ALLSGESRAT RSAQGGVQRA RQLAKQFQGL LKGRLVIGAV SDPEHPRWLG CLLAFAYPDR IAQQRRAGGA DYRLANGRAA QFAEADALMK HEWLVVADLG SRQGQREERI YLAADLDPAL FERELAEQVT TLEVLDWDER EGVLRAERQR KVGELVLERQ ALAALDEDTR SRALVGLVRR KGLELLPWTP ELRQWQARVA LLRELDLQQH GQSEWPDLSD AALLASLEQW LAPFLGKVNR LSHFANLDLP AILQTLLPWP LPQRLDELAP RTLSVPSGSR IAIDYTENPP VLAVRLQELF GLAATPRIAG GRLGLKLHLL SPARRPVQVT QDLASFWANT YLEVKKDLKG RYPKHYWPDD PLIAEPTARA KPRK
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