Gene Pmen_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3714 
Symbol 
ID5105709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4097583 
End bp4098221 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID640504969 
ProductTetR family transcriptional regulator 
Protein accessionYP_001189194 
Protein GI146308729 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGAC GAACCAAAGA AGAGGCACAG GCGACGCGGG CGCAGATACT CGATGCCGCG 
GAGCAGGTGT TCCACGCCCA GGGCGTATCC CGGGCGTCAC TGGCGGAGGT GGCCAAGGCG
GCGAGCGTCA CCCGCGGCGC CATCTACTGG CACTTCGAGA ACAAGATCGA TCTGTTCCAG
GCCATGCTCG AGCGTCTGCG TCTGCCGCTG GAGGAACTGG CGCGGGCCAG CGAGAGCGAG
GACGAACCCG ACCCGCTGGG CTGCATGCGC GAACTGCTGA TCAAGGCTCT GACACGCCTG
GCGAGCGAGC CGCAGACCCG GCGTACCCAT GACATCCTGC GTTACAAATG CGAGTACACC
GGCGAGCTGC TCGGCCTGCG CGAGCGCATG CAGGCGCTCA GTGCCGAGTG CGATCAGCGC
ATCGCCAAGG CGTTGAGCAA CGCCGTCGGC AAGGGCCAGC TACCGGCTGA GCTGGACTGC
CGGCGCGCGG CCGTCTGCCT GCATGCCTAC ATGGAAGGCA TCGAGGCCAA CTGGCTGCTG
GTACCCAGCT TCGACCTGGC TGCCCAGGCC CCGGCGCTGG TCGATACCGT GCTGGACATG
CTGCGCAGCC CCGCGCTGCG TCGGGTGCCG ACTGGTTAA
 
Protein sequence
MVRRTKEEAQ ATRAQILDAA EQVFHAQGVS RASLAEVAKA ASVTRGAIYW HFENKIDLFQ 
AMLERLRLPL EELARASESE DEPDPLGCMR ELLIKALTRL ASEPQTRRTH DILRYKCEYT
GELLGLRERM QALSAECDQR IAKALSNAVG KGQLPAELDC RRAAVCLHAY MEGIEANWLL
VPSFDLAAQA PALVDTVLDM LRSPALRRVP TG