| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3709 |
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| Symbol | |
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| ID | 5105704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4092305 |
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| End bp | 4094350 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504964 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001189189 |
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| Protein GI | 146308724 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAGA TGTCCGTATT CAGCCTGCTG GCCGCCAGTG CCAGCCTGGC CACCTGCGCT
CATGCCGCGC ATATCGAGCT GGAAGACAGC ACCGTGGTGG CGCGCGAGCA GCGCGATGCC
ACCGCACCGA GCATCGCCGA GAAGCGCGCC GAGTTCGCGC GCATTCCCGG CGGTGCGGGC
ATCGTCGATG CCGACACCTA CAAGATCGGG CGTGCGAGCT CGCCGCAGGA TGCCCTCGGG
CACGCCACCG GGGTCTACAT CCAGTCGCGC TCCGGCGCCG AGGAGTCGCG CCTGTCGATC
CGCGGCTCGG GTCTGCAGCG CACCTTCCAC CAGCGCGGCA TCCTGCTGAT GCAGGATGGT
GCGCCGCTGA ACCTGGCCGA TGGCAGTGGC GATTTCCAGA GCATCGAGCC GATCGCCCTG
GACCACATCG AGGTGATGCG TGGCGCCAAT GCCTGGCGCT ACGGCGCGGC CAACCTGGGC
GGGGCGATCA ACTTCGTCAC GCCCACCGGC AAGAGCGCGC CCAAGGCGCA ACTGCGCACC
GAGGCGGGGA GTTTCGACTA CCGCCGCGTC TTCGGCGCCG TCGCCCAGGA CTTCGGCGAC
TGGGACGCCT ACCTGAGCGT TTCCGACTAT TCCCAGGACG GTTTCCGCGA TCACGCCCGT
CAGGACAATC AGCGCTACTT CGCCAACATC GGCGGGCGCA TCAACGAAAG GCTGTCCACG
CGCTTCCACG TCAGCCACGT GGAAACCGAC TCGGAAATTC CCGGCAGCCT GACCAAGGCG
CAGCTGCGGC GTAACCCCGA GCAGGCCGCG TCGAGCGCGG TGACGGGCGA CAACAAGCGC
GATTTCACGC TCAACCGGTT CGGCAACATC ACCACCCTGC AACTCGATGG CGGCCACAGC
CTGGAGCTGT CGAGCTTCTA CAGCGAGAAG TCGCTGTGGC ACCCGATCTT CCAGGTACTG
GAGGTGGACA GCGAGGACCT CGGCGTACGC CTGACGCACA AATGGCACAA CGCCGAGGGA
TGGCACTGGA GCGCCGGCGT CGAGGCGCTG CAGGGGCGCA ATCAGACGAA GAATTACGTC
AATGTTGCCG GCCGGCGCGG CAATCTGGTC GACCGTCAGC TGCAGACTGC ACGCAGCCTC
AACGCCTTCA GCGAGCTGGA AGTGCCGCTG GCCGAGGACT GGGCGCTGAT CGGTGGCCTG
ACCTGGCTGC ACAGCGAGCG GGACGTCGAC GACAAGCTCA AGAGCAGCTT CAACTTCGCC
GGCTTGCCCA GCGGTTTTCG CGACGACTCC TTCACCAGAA GTTACAGTGC GCGGATTGGC
CGGATCGGTC TGCGCCACGA ACTGGCCGAG GGCGTGCAAC TGTTCGGCAA CCTCAGCCAG
AGCTTCGAGC CGCCCACCTT CAGCGAGCTG ACCGGTGGCG CCATCGTTAC CGAGAACGAC
GCGCAGAAGG CCACCACGCT GGAAGCCGGC ATGCGCATCA GCCGGGGCCA CCTGGATCTG
GATCTGGCTG TGTACCGCAG CGAGGTTCGC GATGAGCTGC TCGGTTATGC CAACCCGCTC
AACCCCACCC AGGTGGTCAC CACCAACGCC GATCGCACCG TGCACCAGGG CATCGAGCTG
GGCGCTGCCT GGCAGCTGGG CAATCTGCTC CTGCGCGGGC AGTACCTGCT CAACGACTTC
CGCTTCGACG ACGATCCCGC CTACGGCAAC AACCGCATCG CCGGCGTGCC GAGCCAGTTC
CTCAAGGGCG AGCTGCTCTG GCAGCAGGGT GGCTGGTATG TCGGCCCGAC CCTGGAATGG
GTGCCGCTGC ACTACGCGGC CGACCATGCC GAGTCGCTGT ATGCCGAGGC CTACGCCATC
TGGGGGATGA AAGGCGGCTA CCGTCCGCGC GAGGGCCTGG GGTTCTTCGT CGAAGGGCGC
AACCTTTCCG ACAAGACCTA CATCGCCACC ACCGGCGTGG TGGCCAACGC CAATGGCCGG
GATGCCGCGC TGTTCATGCC CGGCGATGGC CGCAGCCTGT ATGTCGGCCT GGAGTGGAAG
CTGTGA
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| Protein sequence | MRQMSVFSLL AASASLATCA HAAHIELEDS TVVAREQRDA TAPSIAEKRA EFARIPGGAG
IVDADTYKIG RASSPQDALG HATGVYIQSR SGAEESRLSI RGSGLQRTFH QRGILLMQDG
APLNLADGSG DFQSIEPIAL DHIEVMRGAN AWRYGAANLG GAINFVTPTG KSAPKAQLRT
EAGSFDYRRV FGAVAQDFGD WDAYLSVSDY SQDGFRDHAR QDNQRYFANI GGRINERLST
RFHVSHVETD SEIPGSLTKA QLRRNPEQAA SSAVTGDNKR DFTLNRFGNI TTLQLDGGHS
LELSSFYSEK SLWHPIFQVL EVDSEDLGVR LTHKWHNAEG WHWSAGVEAL QGRNQTKNYV
NVAGRRGNLV DRQLQTARSL NAFSELEVPL AEDWALIGGL TWLHSERDVD DKLKSSFNFA
GLPSGFRDDS FTRSYSARIG RIGLRHELAE GVQLFGNLSQ SFEPPTFSEL TGGAIVTEND
AQKATTLEAG MRISRGHLDL DLAVYRSEVR DELLGYANPL NPTQVVTTNA DRTVHQGIEL
GAAWQLGNLL LRGQYLLNDF RFDDDPAYGN NRIAGVPSQF LKGELLWQQG GWYVGPTLEW
VPLHYAADHA ESLYAEAYAI WGMKGGYRPR EGLGFFVEGR NLSDKTYIAT TGVVANANGR
DAALFMPGDG RSLYVGLEWK L
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