Gene Pmen_3694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3694 
Symbol 
ID5110155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4077242 
End bp4078738 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content67% 
IMG OID640504949 
Productmethylmalonate-semialdehyde dehydrogenase [acylating] 
Protein accessionYP_001189174 
Protein GI146308709 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01722] methylmalonic acid semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACA TCCCCCACCT GATCAACGGC GAGCGCGTTG CCGGCAACGG TCGCAGTGCC 
TCGGTCTACA ACCCGTCCAC CGGCGACTCC ACCTCTGCCG TCGGCCTGGC CGACCGCGCC
ACCATGCAAC TGGCCATCGA CGCCGCCAAG GCCGCCTTTC CGGCCTGGCG CAACACTCCA
CCGGCCAAGC GCGCGCAGAT CATGTTCCGC TTCAAGCAAC TGCTGGAGCA GAACGAGAAC
GAAATCGCCG CGCTGATCAG CGCCGAGCAT GGCAAGACCC TCGAGGACGC CGTCGGTGAA
CTCAAGCGCG GCATCGAGAA CGTCGAGTTC GCCTGCGCCG CCCCGGAAAT CCTCAAGGGC
GAGTACAGCC GCAACGTCGG CCCGAACATC GACGCCTGGA CCGATCTGCA GCCCATCGGC
GTGGTGGCTG GCATCACCCC GTTCAACTTC CCGGCCATGG TGCCGCTGTG GATGTACCCG
CTGGCCATCG TCTGCGGCAA CTGCTTCATC TTGAAGCCCT CCGAACGCGA TCCCAGCTCC
ACCCTGTTTA TCGCCGAGCT GGCGCACCAG GCCGGCCTGC CCAAGGGCGT GCTGAACGTG
GTCAACGGCG ACAAGGACGC GGTCGATGCG CTGATCGAGG CGCCCGAGGT CAAGGCCCTG
AGCTTCGTCG GCTCGACGCC GATCGCCGAG TACATCTATA GCGAGGGCAC CAAGCGCGGC
AAGCGCGTGC AGGCCCTGGG CGGCGCCAAG AACCACGCCG TGCTGATGCC CGATGCCGAC
CTGGACAACG CCGTCAGCGC GCTGATGGGC GCGGCCTACG GTTCCTGCGG CGAGCGCTGC
ATGGCCATCT CCGTGGCCGT GTGCGTGGGC GACCAGATCG CCGATGCACT GGTGGAGAAG
ATCGTCCCGC AGATCCAGGC GCTGAAGATC GGTGCCGGCA CCTCCTGTGG GCTGGACATG
GGCCCGCTGG TCACCGCCGC TGCGCGTGAC AAGGTCAAGG GCTACATCGA TGCCGGTGTG
GCGCAAGGCG CCAAGCTGGT GGTCGACGGC CGCGGCCTGG TGGTACCGGG TAACGAGAAC
GGCTTCTTCG TCGGCGGCAC CCTGTTCGAC CGGGTAACCC CGGAGATGAC CATCTACACC
GACGAAATCT TCGGCCCGGT GCTGTGCATC GTCCGCGTCG GCAGCCTGGA AGAAGCCATG
CAGCTGATCA ACGATCACGA GTACGGCAAC GGCACCTGCA TCTTCACCCG TGACGGTGAA
GCGGCGCGCC TGTTCTGCGA CGAGATCGAA GTGGGCATGG TCGGCGTCAA CGTGCCGCTG
CCGGTGCCGG TGGCCTACCA CAGCTTCGGC GGCTGGAAGC GCTCGCTGTT CGGCGACCTG
CACGCCTACG GCCCGGATGG CGTGCGCTTC TACACCCGCA AGAAGGCCAT CACCCAACGC
TGGCCGGCGC GCAAGAGCCA TGAGGCGGCG CAGTTCGCCT TCCCCAGCAA TGGCTGA
 
Protein sequence
MSHIPHLING ERVAGNGRSA SVYNPSTGDS TSAVGLADRA TMQLAIDAAK AAFPAWRNTP 
PAKRAQIMFR FKQLLEQNEN EIAALISAEH GKTLEDAVGE LKRGIENVEF ACAAPEILKG
EYSRNVGPNI DAWTDLQPIG VVAGITPFNF PAMVPLWMYP LAIVCGNCFI LKPSERDPSS
TLFIAELAHQ AGLPKGVLNV VNGDKDAVDA LIEAPEVKAL SFVGSTPIAE YIYSEGTKRG
KRVQALGGAK NHAVLMPDAD LDNAVSALMG AAYGSCGERC MAISVAVCVG DQIADALVEK
IVPQIQALKI GAGTSCGLDM GPLVTAAARD KVKGYIDAGV AQGAKLVVDG RGLVVPGNEN
GFFVGGTLFD RVTPEMTIYT DEIFGPVLCI VRVGSLEEAM QLINDHEYGN GTCIFTRDGE
AARLFCDEIE VGMVGVNVPL PVPVAYHSFG GWKRSLFGDL HAYGPDGVRF YTRKKAITQR
WPARKSHEAA QFAFPSNG