| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3683 |
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| Symbol | |
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| ID | 5110144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4066632 |
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| End bp | 4067600 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504938 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001189163 |
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| Protein GI | 146308698 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.719488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCC AGGCTTTCTA CCGCGTGGTA GCGGACGATT TCACCGCCGT CGATGGCATC
ATTCGCCAAC AGGTGGTTTC CCGAGTGCCA CTGGTGGAAA AGATCGGCGA CTATATCATC
TCCGCCGGCG GCAAGCGCCT GCGGCCGCTG CTGGTACTGC TCAGCGGTCG CGCACTGGGC
TACCAGGCCG ACGACCTGCG CCTGCTGGCC GCCACCATCG AATTCCTGCA CACCGCCACC
CTGCTGCACG ACGACGTGGT CGACATGTCC GACATGCGCC GTGGCCGCAG CACCGCCAAT
GCCCAGTGGG GCAATGCGCC GAGCGTGCTG GTGGGCGACT TCCTTTATTC GCGCTCGTTC
GAAATGATGG TCGAGCTCGG CTCCATGCCG GTGATGAAGA TTCTCTCCCA CGCCACTCGC
GTGATCGCCG AGGGCGAAGT GCTGCAGCTG TCCAAGGTGC GTGACGCCAG CACCACGGAA
GAGACCTATA TGGAAGTCAT CCGCGGCAAG ACCGCGATGC TGTTCGAGGC CTCGACCCAC
AGCGCCGCGG CGCTGGCCGG CGCCAACGAG GCGCAGCGCG AAGCCCTGCG CACCTTCGGC
GACCACCTGG GCATCGCCTT CCAGCTGGTC GACGACCTGC TCGACTACAA GGGCGATGCG
GCCGAACTGG GCAAGAACGT CGGCGACGAC CTGGCCGAAG GCAAACCGAC CCTGCCGCTG
ATCTACACCA TGCGCGAAGG CAGCGAGGAG CAGGCCGCTC TGGTGCGCCG CGCCATTCAG
AAAGGCGGTA TCGAAGACCT GGAAAGCATC CGCGCCGCCG TGGATGCCGC CGGCGCCCTG
GACTACACCG CCCGTCTCGC CCGTGACTAC GCCGAACGCG CCATCGCCTG CCTGGACGTG
CTGCCGGCCG GCGAGTATCG CGATGCGCTG ATCGAGCTGA GCCGTTTCGC CGTAGCCCGT
ACGCATTGA
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| Protein sequence | MQPQAFYRVV ADDFTAVDGI IRQQVVSRVP LVEKIGDYII SAGGKRLRPL LVLLSGRALG
YQADDLRLLA ATIEFLHTAT LLHDDVVDMS DMRRGRSTAN AQWGNAPSVL VGDFLYSRSF
EMMVELGSMP VMKILSHATR VIAEGEVLQL SKVRDASTTE ETYMEVIRGK TAMLFEASTH
SAAALAGANE AQREALRTFG DHLGIAFQLV DDLLDYKGDA AELGKNVGDD LAEGKPTLPL
IYTMREGSEE QAALVRRAIQ KGGIEDLESI RAAVDAAGAL DYTARLARDY AERAIACLDV
LPAGEYRDAL IELSRFAVAR TH
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