Gene Pmen_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3681 
SymbolrpmA 
ID5110142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4065779 
End bp4066036 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content59% 
IMG OID640504936 
Product50S ribosomal protein L27 
Protein accessionYP_001189161 
Protein GI146308696 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0211] Ribosomal protein L27 
TIGRFAM ID[TIGR00062] ribosomal protein L27 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACA AAAAAGCTGG CGGTTCTACC CGTAACGGCC GCGATTCCGA AAGTAAACGC 
CTTGGCGTGA AGATGTACGG TGGCCAGGTC ATCAAGGCCG GCAACATCAT CGTTCGTCAG
CGCGGCACCG AGTTCCACCC GGGTTTCGGC GTGGGCATGG GCAAGGACCA CACCCTCTTC
GCCAAGATCG AAGGCGTGGT CAAGTTCGAA GTGAAGGGCG CTTTCGGCCG TCGCTACGTG
AGCGTTGTTC AGGCCTAA
 
Protein sequence
MAHKKAGGST RNGRDSESKR LGVKMYGGQV IKAGNIIVRQ RGTEFHPGFG VGMGKDHTLF 
AKIEGVVKFE VKGAFGRRYV SVVQA