Gene Pmen_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3678 
Symbol 
ID5110139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4062648 
End bp4063106 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content64% 
IMG OID640504933 
ProductCreA family protein 
Protein accessionYP_001189158 
Protein GI146308693 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCGT TCAAGGGAGT GTTGCTGGGG CTGCTGATGT TGCCCGGCCT GGCACTGGCC 
GAGACCATCG GTGAAGTGTC TACGGTGTTC AAGTGGGTGG GGCCTAACGA CAAGATCGTC
GTCGAGGCTT TCGATGATCC CAAGGTGGCG GGCGTGACCT GCTACCTGTC GCGCGCCAAG
ACCGGCGGTG TGAAGGGTGG CCTGGGGCTG GCCGAGGATC GCGCCGAGGC GTCCATCGCC
TGTCGTCAGG TCGGCCCCAT CGAGTTCAAG GGCAAGCTCA AGGACGGCGA GGAAGTCTTC
AAGGAGCGCA CCTCGCTGGT GTTCAAGACC ATGCAGGTGG TGCGTTTCTT CGACGCCAGG
CGCAACACGC TGGTGTATCT GGTCTACAGC GACCGGGTGA TCGAAGGCAG CCCGCAGAAT
GCGGTCACCG CCATCCCCAT CCTGCCCTGG GGCCAGTAG
 
Protein sequence
MRPFKGVLLG LLMLPGLALA ETIGEVSTVF KWVGPNDKIV VEAFDDPKVA GVTCYLSRAK 
TGGVKGGLGL AEDRAEASIA CRQVGPIEFK GKLKDGEEVF KERTSLVFKT MQVVRFFDAR
RNTLVYLVYS DRVIEGSPQN AVTAIPILPW GQ