Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3649 |
Symbol | |
ID | 5110110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4031345 |
End bp | 4032001 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504904 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001189129 |
Protein GI | 146308664 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA GGCGTAATCT GATCGCGGCC ACCGCGGTCA TGGCCTTGCT GGCCGGCTGT ACCACCAACC CCTATACCGG CGAGCAGCAG GCCGGCAAAG CCGGCATCTA CGGCGGTATC GGTGCGGTGA CCGGTGCCGC GATCGGTGCA GCTACCTCGA GCAAGAAAGA CCGTGCCAAG GGCGCGCTGA TCGGTGCTGC GGTGGGCGGT GCGGCGGGTG GCGGCTACGG CTACTACGTC GATACCCAGG AAGCCAAGCT GCGCCAGACC CTGCAGGGCA CCGGCGTGCA GGTGCAACGC AATGGCGATG ACCTGAAGCT GATCATGCCG GGCAACATCA CCTTCGCCAG CAACTCGGCC GACATTTCCA GCAGCTTCTA TCCGACCCTG AATTCGCTGG TGCTGGTGTT CAAGGAATTC AACAAGAATG GCGTGAACAT CGTCGGTCAC ACCGACAGCA CCGGTTCGCA GGAGCTGAAT CAGAGTCTGT CCAGCCGCCG TGCGCAGAGC GTGGCCAACT ACCTGACCGC CAACGGCGTA CCGGGCCAAC GCATTTCCGC CTACGGCGCA GGCCCGAGCC AGCCGATCGC CAGCAACGCC ACCGATGCCG GCCGTGCGCA GAACCGCCGC GTCGAGATCA ATCTGCGTCC GCTCTGA
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Protein sequence | MNTRRNLIAA TAVMALLAGC TTNPYTGEQQ AGKAGIYGGI GAVTGAAIGA ATSSKKDRAK GALIGAAVGG AAGGGYGYYV DTQEAKLRQT LQGTGVQVQR NGDDLKLIMP GNITFASNSA DISSSFYPTL NSLVLVFKEF NKNGVNIVGH TDSTGSQELN QSLSSRRAQS VANYLTANGV PGQRISAYGA GPSQPIASNA TDAGRAQNRR VEINLRPL
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