Gene Pmen_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3627 
Symbol 
ID5110088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4003671 
End bp4004090 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content58% 
IMG OID640504882 
Productferric uptake regulator family protein 
Protein accessionYP_001189107 
Protein GI146308642 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGC AGACCATGGT TGAAAATAAC GAACTGCGCA AAGCTGGACT GAAGGTGACC 
CTGCCGCGGG TCAAAATCCT GCAGATGCTG GACAACGCCG AGCACCGCCA CATGAGTGCG
GAAGACGTCT ACAAGGCACT GATGGAAGCC GGTGAAGACG TCGGTCTGGC GACCGTGTAC
CGCGTGCTGA CCCAGTTCGA GGCCGCTGGT CTGGTGGTGC GCCACAACTT CGATGGCGGC
CATGCGGTGT TCGAACTGGC CGACAGCGGC CACCACGATC ACATGGTCTG TGTCGATTCC
GGCGAAGTGA TCGAGTTCTT CGACGCCGAG ATCGAGAAGC GCCAGAAGGA AATCGTCAAG
GAGCACGGTT TCGAGCTGGT CGATCACAAC CTGGTGCTGT ACGTGCGCAA GAAGAGCTGA
 
Protein sequence
MRKQTMVENN ELRKAGLKVT LPRVKILQML DNAEHRHMSA EDVYKALMEA GEDVGLATVY 
RVLTQFEAAG LVVRHNFDGG HAVFELADSG HHDHMVCVDS GEVIEFFDAE IEKRQKEIVK
EHGFELVDHN LVLYVRKKS