| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3614 |
|---|
| Symbol | |
|---|
| ID | 5106161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3987494 |
|---|
| End bp | 3988345 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640504869 |
|---|
| Product | dihydropteroate synthase |
|---|
| Protein accession | YP_001189094 |
|---|
| Protein GI | 146308629 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01496] dihydropteroate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAC GGCAATACCC GAGCCGGCTG CCCTGTGGCA GCCGGCTTCT TGATTTGTCC
CGTCCGCAAG TGATGGGCAT CCTCAACGTC ACGCCCGATT CATTCTCTGA CGGTGGTCGC
TTCGTTGCCC GTGACGCTGC GCTACGCCAT GCCGAGGCGA TGGTCGCCGC TGGTGCGACG
CTGATCGATA TCGGGGGTGA GTCCACCCGT CCTGGGGCGC GCAGCGTTTC GCCGACCGAG
GAACTGGAGC GCGTGGCCCC GATGGTCGAA GCCATCGCTC GTGAGCTCGA CGTGATCATT
TCCGTGGATA CCTCGACGCC GGCCGTCATG CGCGAAAGCG CGAGGCTTGG GGCCGGGCTG
ATCAATGACG TACGCTCGCT GCAGCGTGAC GGTGCGCTGG ATGCTGCGGC AGACACGGGT
CTGCCGGTGT GTCTGATGCA CATGCGCGGC GAACCGGGGA CGATGCAGGA CAATCCGCAG
TACCCGGACA TCGTTGTCGA GGTGCGTGAT TTTCTCGTCG AGCGCATGGC GGCGTGCGCG
ACAGCCGGTA TTCCCGCCGA GCGGATCGTG CTCGATCCGG GCTTTGGTTT TGCCAAGACA
CTGGAGCACA ATCTCGCCCT GTTCAAACAC ATGGGCGAGC TCCTGGCACT GGGGAGGCCC
TTGCTGGTAG GCGTTTCTCG CAAGAGCATG ATCGGCAAGG TGCTTGGTCA CGAGGTCGGC
GAGCGGCTCT ATGGCAGCCT GGGGTTGGCG GCTCTGGCCC TGACCAAGGG CGCGAATATT
CTGCGTGTGC ACGATGTTGC CGAAACGGTG GACGTGGTGC GCATGATCGC TGCGGTCGAG
GCAGCGCAAT AA
|
|---|
| Protein sequence | MFERQYPSRL PCGSRLLDLS RPQVMGILNV TPDSFSDGGR FVARDAALRH AEAMVAAGAT
LIDIGGESTR PGARSVSPTE ELERVAPMVE AIARELDVII SVDTSTPAVM RESARLGAGL
INDVRSLQRD GALDAAADTG LPVCLMHMRG EPGTMQDNPQ YPDIVVEVRD FLVERMAACA
TAGIPAERIV LDPGFGFAKT LEHNLALFKH MGELLALGRP LLVGVSRKSM IGKVLGHEVG
ERLYGSLGLA ALALTKGANI LRVHDVAETV DVVRMIAAVE AAQ
|
|---|
| |