| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3612 |
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| Symbol | tpiA |
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| ID | 5106159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3985322 |
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| End bp | 3986077 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640504867 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001189092 |
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| Protein GI | 146308627 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCGCC CCTTGGTCGC CGGTAACTGG AAAATGCACG GTACCCGCGC CAGCGTCGCA
GAGCTGATCG AAGGGTTGCG TCGGCAGGAG TTGCCTGTCG AGGTGGATGT CGCGGTGTTT
CCCTCCAGTC TGCATGTCAC GCAGGTCGTT GAAGGCCTGG CAGGCAAGGC AGTGAAAGTT
GGGGCGCAAG ATTGCGCAGC GCAGGTGGAG CAGGGCGCCT TGACCGGTGA GCTGGCAGTG
AGTCAGTTGG TCGATGGCGG TTGCGAACTG GTGCTGGTCG GCCACTCCGA GCGTCGCCTG
ATTCTGGGTG AAAGTGACGA GGTGGTCGTT AGCAAGTTCG CGGCGGTGCA GAAGGCGGGG
CTGACCCCTG TGCTCTGCGT CGGTGAGACC CGTGAGCAGC GTGAGGCGAA TGCGACGCTG
GGTGTGGTGG GTGGTCAGTT GGCGGCGGTG ATAGATGCTC TTGGCGTCCA GGCCCTGAAC
AACGCCGTTG TCGCTTATGA GCCTGTCTGG GCCATTGGCA CCGGGTTGAC CGCTACGCCC
GAGCAAGCTC AGGAAGTTCA TGCGGCTATC CGCGCGCAGG TCGCGCAGCT GGATGCGCAG
GTGGCCAGTG AGCTGAGAAT TCTTTATGGC GGCAGTGTAA AGGCCGCCAG TGCAGCCGAG
TTGTTCGGCA TGCAGGATAT CGATGGGGGG CTTGTAGGTG GCGCCTCTCT GAATGCGGAT
GAATTCGGTG CGATCTGTCG CGCTGCAGGA AACTGA
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| Protein sequence | MRRPLVAGNW KMHGTRASVA ELIEGLRRQE LPVEVDVAVF PSSLHVTQVV EGLAGKAVKV
GAQDCAAQVE QGALTGELAV SQLVDGGCEL VLVGHSERRL ILGESDEVVV SKFAAVQKAG
LTPVLCVGET REQREANATL GVVGGQLAAV IDALGVQALN NAVVAYEPVW AIGTGLTATP
EQAQEVHAAI RAQVAQLDAQ VASELRILYG GSVKAASAAE LFGMQDIDGG LVGGASLNAD
EFGAICRAAG N
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