Gene Pmen_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3598 
Symbol 
ID5106145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3970033 
End bp3971049 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content68% 
IMG OID640504851 
Producthypothetical protein 
Protein accessionYP_001189078 
Protein GI146308613 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTC TTGACCAGGC GCTGCGCGCC GCCCTCGACG CCCGCCAGAG TCTTCTGGCC 
GAACTGCACG CCCAGGGCAC CGACTGCTAC CGACTGTTCC ATGGCAGCCA GGAAGGTGCG
CCAGGCCTGA CCGTCGACCG CTACGGCCCG CAGCTGCTGG TGCAGAGTTT TCATCAGCCG
TTGCAGGCAG ATGACCTGCA CAGCATCACC AGCAGCGTCG AAGCCTATCT TGGGCACAGC
CTGCTGCCGG TCTACAACGA CCGCTCCCAG GGCAACTCGC GCATCGACCG CGATCCGGCG
CTATTTCTGG CCAGCGATGC CGCCCTCGAA GACCTGGTCG GCCACGAGTG GGGGCTGAAC
TACCGCGTGC GCGGCCGCCA TGCCGGGCAG GATCCGCTGC TGTTTCTCGA CCTGCGCAAC
GCCCGCGGCT GGGTCAAGGC CAACAGCGCT GGCAAGTCCG TGCTCAACCT GTTCGCCTAC
ACCTGCGGCG TCGGCCTGTG CGCCGCGGCT GGCGGCGCAC GCGAGGTGAC CAACCTCGAC
TTCGCTCAGG GCAACCTGGC CGTGGGTCGC GAGAACGGCG CGCTGAATCC CGAACTGCCG
AGCATGCAGT TCATTCAATC CGACTACTTC CCGGCCATCC GTCAGTTGGC CGATCTGCCG
ATCGCCAGCC GCCGCGGGCA GAAGCTGCCG AGCTATCCGC GCCTGCAACC ACGCCAGTTC
GATCTGGTTT TCCTCGACCC GCCGGCCTGG GCCAAGAGCG CCTTCGGCAC GGTCGACCTG
CTGCGCGACT ACCAGAGCCT GCTCAAACCG GCGCTGCTGG CCACCGCAGA GGGCGGCACC
CTGGTGTGCT GCAACAACCT GGCGAAGGTG GCGCTGGAGG ACTGGCGCCA GCAGGTGCTG
CGCTGCGCGG AGAAACTCGG CCGCCCGGTA CGCGACTGCC AGGTGCTGAC ACCCGCCGCC
GATTTCCCAT CCACGGACGC CAGGCCGCCG CTGAAAACCC TGATCCTGAG GCTCTAG
 
Protein sequence
MPSLDQALRA ALDARQSLLA ELHAQGTDCY RLFHGSQEGA PGLTVDRYGP QLLVQSFHQP 
LQADDLHSIT SSVEAYLGHS LLPVYNDRSQ GNSRIDRDPA LFLASDAALE DLVGHEWGLN
YRVRGRHAGQ DPLLFLDLRN ARGWVKANSA GKSVLNLFAY TCGVGLCAAA GGAREVTNLD
FAQGNLAVGR ENGALNPELP SMQFIQSDYF PAIRQLADLP IASRRGQKLP SYPRLQPRQF
DLVFLDPPAW AKSAFGTVDL LRDYQSLLKP ALLATAEGGT LVCCNNLAKV ALEDWRQQVL
RCAEKLGRPV RDCQVLTPAA DFPSTDARPP LKTLILRL