Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3590 |
Symbol | |
ID | 5106137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3959842 |
End bp | 3961233 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640504843 |
Product | poly(A) polymerase |
Protein accession | YP_001189070 |
Protein GI | 146308605 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.787264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA AGCTGTTTAC GTCTTTTCGC TCGCCCCTGC GCCGCGCGCC ACGTCCTCGC AGCACGCCCG AAGTGCTGAG CAGCCGTCAA CACCCGATCA ATCGCAACGA GATCAGCCGT CACGCCATCA GCGTGGTCGA GCGCTTGCAG AAGGCCGGTT ATCAGGCCTA TCTGGTCGGC GGCTGCGTGC GTGACCTGCT GCTGGACATC GACCCCAAGG ACTTCGACGT GGCCACCAGC GCCACGCCCG AGCAGGTGCG CGCCGAGTTT CGCAACGCCC GCGTCATCGG TCGCCGGTTC AAGCTGGTTC ATGTGCACTT CGGCCGCGAG ATCATCGAAG TGGCCACCTT CCGTGCCAAC CACCCGCAAG GCGAGGAAGA GGAGAACAGC AACCAGGCCG CGCGCCACGA AAGCGGGCGC ATCCTGCGCG ACAACGTCTA CGGCACCCTG GAGGACGACG CCCAGCGTCG CGACTTCACC ATCAATGCGC TGTACTACGA CCCGACGCAG GAGCACATCC TCGATTACGC CCGTGGCATG CATGACGTGC GCAATCACCT GGTACGCCTG ATCGGCGATC CGGAACAGCG CTACCTGGAA GACCCGGTGC GCATGCTGCG TGCGGTGCGC TTCGCCGCCA AGCTGGACTT CGACATCGAG AAGCACAGCG CCGCGCCGAT CCGCCGCCTG GCCCCGATGC TGCGCGACAT CCCGGCAGCG CGGCTGTTCG ATGAGGTGCT CAAGCTGTTC CTGGCCGGTT ACGCCGAGTA CACCTTCGAT CTGCTGCTCG AACACGACCT GTTCGCCCAG CTGTTCCCGG CCAGCGGCGA GGCGCTCAAG CGCAATCCCG AGTACACCGA GAAGCTGATC CGCGAAGCGC TGATCAACAC CGATGACCGC ATCCACGATG GCAAGTCGGT CACCCCGGCC TTCCTCTTCG CCGCCCTGCT CTGGCCAGCC CTGCCGGCCC GTGTGCTGCA TCTGCAAAGC AAGGGCATGC CGCCGATTCC GGCGATGCAG GAAGCGGCCC ACGAGCTGAT CACCGAGCAG TGCCAGCGCA TTGCCGTACC CAAGCGCTTC ACCATTCCCA TCCGCGAAAT CTGGGACATG CAGGAGCGCC TGCCGCGACG TAGCGGCAAG CGTGCCGACC TGCTGCTGGA AAACCCGCGC TTTCGCGCAG GCTATGACTT CCTGCTGCTG CGCGAGCGCG CTGGCGAAGA CACCGAAGGC CTGGGCGACT GGTGGACCGA CTACCAGGAC GCCAGCGACA GCCAGCGTCG GCAGATGATC CGCGATCTGG CCGGCAAACC GGAGGCGGCA GGCAGCGCAC CGCGCAAACG CCGCCGCAGC GGCGGCAAAC GCAAGCGCGG CGGTGAGAGC AGCGGCGAAT GA
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Protein sequence | MLKKLFTSFR SPLRRAPRPR STPEVLSSRQ HPINRNEISR HAISVVERLQ KAGYQAYLVG GCVRDLLLDI DPKDFDVATS ATPEQVRAEF RNARVIGRRF KLVHVHFGRE IIEVATFRAN HPQGEEEENS NQAARHESGR ILRDNVYGTL EDDAQRRDFT INALYYDPTQ EHILDYARGM HDVRNHLVRL IGDPEQRYLE DPVRMLRAVR FAAKLDFDIE KHSAAPIRRL APMLRDIPAA RLFDEVLKLF LAGYAEYTFD LLLEHDLFAQ LFPASGEALK RNPEYTEKLI REALINTDDR IHDGKSVTPA FLFAALLWPA LPARVLHLQS KGMPPIPAMQ EAAHELITEQ CQRIAVPKRF TIPIREIWDM QERLPRRSGK RADLLLENPR FRAGYDFLLL RERAGEDTEG LGDWWTDYQD ASDSQRRQMI RDLAGKPEAA GSAPRKRRRS GGKRKRGGES SGE
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