Gene Pmen_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3575 
Symbol 
ID5106122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3943459 
End bp3943920 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID640504828 
Productglobin 
Protein accessionYP_001189055 
Protein GI146308590 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.425401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCTT TTGCGCAGAA TGGCTCGATG AGCGACACAC TTCCCTACGG CACCGGCGAC 
GCCTCGTACC AGGCCGCCGG CGGTATCGAT GGCCTGCGCC GCCTGGTTGA CGACTTCTAC
CGGCTGATGG ACGAACGCCC CGAGGCGGCC GCCCTGCGCG CCCTGCACCC GGTCTCCTTA
AGTGCCTCGC GCGACAAGCT GGCGTGCTTT CTCAGTGGCT GGCTGGGCGG GCCAAGGCTG
TTCGCCGAGA AGTACGGCAG CATCAGCCTC CCCAGCTTCC ATGCGCAGTG GCCGATCGAC
GAGGCCCTGG CCGAGAGCTG GCTGAGCTGC ATGGCCGGCG CCATCGCCCT GCAGAACTAT
GAGCCGGCCT TTGCCGACTA CCTGCTGGCC CAGTTGCGCG TGCCCGCCCA GCGCGCCGTG
CAGGCCAGCC AGAACCGACA CAAGAGTGGA AACCCGACAT GA
 
Protein sequence
MAPFAQNGSM SDTLPYGTGD ASYQAAGGID GLRRLVDDFY RLMDERPEAA ALRALHPVSL 
SASRDKLACF LSGWLGGPRL FAEKYGSISL PSFHAQWPID EALAESWLSC MAGAIALQNY
EPAFADYLLA QLRVPAQRAV QASQNRHKSG NPT