| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3574 |
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| Symbol | |
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| ID | 5106121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3942735 |
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| End bp | 3943427 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504827 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001189054 |
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| Protein GI | 146308589 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.458769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTAACT TCCTGTTCAC CGAGAAATTC GCCTTTTCCA GGGGCGACAG CGTGGTGGTG
ATCGGCCTGG GCCGCTTCGG CGGCTCGGTG GCCCACTCGC TGATGCGCCT GGGCCACGAC
GTCATGGGCA TCGACTGTGA CGCCGAGCCG GTACACGCCT GGGCCGACCT GCTGACCCAT
TGCGTGCAGG CCGACTCGAC CAATGTCATG GTCCTGCGCC AGCTCGGCGT GGCCGACTTC
AATCACGCCA TCGTCGGCAT CGGCACCGAC CTGGCCGCCA GCCTGATGAC CCTGATGGCG
CTCACCGAGC TGGGCATTCA GGACATCTGG CTCAAGGCCC TGACCCCGGA GCACGGCAAG
ATCGCCGAGC GCATCGGCGC CCACCATGTG GTCTACCCGG AGGCGGACAT GGGCGAGCGG
GTGGCGCACC AGATCACCGG CCGGCTGATG GACTTCATCG AGTTCGAGGA CGGCTTCGCC
ATCGCCAAGA TCAAGGCGCC CGAGCTGAGC TTCAACAGCA CCCTGGCCGA GGCCGGCATC
CGCGAGAAGC ACGGCATCAC CGTGGTCGGG CTGAAACGCG CCAACCAGGA CTTCCAGCAT
GCCACGCCGA GCACGCGGAT CTTGCCCGGC GACCTGCTGA TCGTCTCCGG CCCGACCCAC
CTGATCCAGA AGTTCGCCGG CCTGGCCAAG TAG
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| Protein sequence | MANFLFTEKF AFSRGDSVVV IGLGRFGGSV AHSLMRLGHD VMGIDCDAEP VHAWADLLTH
CVQADSTNVM VLRQLGVADF NHAIVGIGTD LAASLMTLMA LTELGIQDIW LKALTPEHGK
IAERIGAHHV VYPEADMGER VAHQITGRLM DFIEFEDGFA IAKIKAPELS FNSTLAEAGI
REKHGITVVG LKRANQDFQH ATPSTRILPG DLLIVSGPTH LIQKFAGLAK
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