| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3572 |
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| Symbol | |
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| ID | 5106119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3938764 |
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| End bp | 3941124 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504825 |
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| Product | DNA polymerase II |
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| Protein accession | YP_001189052 |
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| Protein GI | 146308587 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.252391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGTGC AGCAGGGTTT CGTTCTGAGT CGCCATTGGC GCGACACGCC GCAGGGCACC
GAGGTGGCCT TCTGGCTGGC GACCGATGCC GGCCCGATAC AGGTGCGCCT GCCGGTTCAG
CCGTCGGTGG CCTTTATTCC GGCCGAGCAG CGGGCCTGGG CCGAGCCGTT GCTGGCCGGC
GAGCAGGGCG CCGAGCTGCG CGAGCTGGCG CTGCGCGACT TCAGGCAGCG CCCGGTGCTG
GGGCTGTACT GCCAGCAGTA TCGCCAACTG CTGCAGCTGG AAAAGAAGCT GCGCCAGGCC
GGCGTGGATG TCTATGAAGC CGATATCCGC CCGCCGGATC GCTATCTGAT GGAGCGCTTT
ATCACCGCCA GCGTGACCTT TGAGGGCGTC GAGCAGCAGG ACGGCAGCCT GCTCTGCAAG
TCGCTCAAGG CCGCTGCCGA TTACCGCCCG GCGCTGCGTC TGGTGTCGCT GGATATCGAG
ACCAGCGCCC GCGGCGAGCT GTATTCCATC GCCCTGGAAG GCTGCGGCCA GCGCCAGGTG
TACATGCTCG GGCCGGCCAA CGGCGATGCC AGCGGCGTGG ATTTCGAGCT GCAGTTCTGC
GACAGCCGCA AGGCCCTGCT GGAACGGCTG AATGACTGGC TGGCGCGCTT CGATCCCGAC
GCCATCATCG GCTGGAACCT GGTGCAGTTC GACCTGCGCG TGCTGCGCGA TCATGCCGAG
CAACTCAAGG TGCCCCTGCG CCTCGGGCGG GGCGGCGACG TGATGGGCTG GCGCCAGCAC
AACAGCAGCC AGCACTACTT CGCCGAGGCG GCCGGGCGGC TGATCATCGA CGGCATCGAG
GCGCTGCGTT CGGCGACCTG GAGCTTCCCC TCGTTCAGCC TGGAGTCGGT GGCGCAGACC
CTGCTCGGCG AGGGCAAGGC CATCGACACG CCCTATGCGC GGATGGACGA GATCCAGCGC
ATGTTCGACG AGGACAAGCC GGCGCTGGCG CGCTACAACC TCAAGGATTG CGAGCTGGTC
ACGCGCATCT TCGCTCACAC CGACCTGCTC GCCTTCCTCC TCGAGCGCTC CAGCGTCACC
GGCCTGGCCG CCGATCGCAG TGGCGGCTCG GTGGCGGCCT TCACCCACCT GTACCTGCCG
CCGATGCACC GCCTGGGCTT CGTCGCGCCG AACCTCGGCG ACATCCGTGG CGAGAACAGC
CCCGGCGGTT TCGTCATGGA TTCGCGCCCT GGCCTGTACG ACTCGGTGCT GGTGCTGGAT
TACAAGAGCC TGTATCCGTC GATCATCCGC AGCTTCCTGA TCGACCCGGT GGGGCTGGTG
GAGGGGCTGC AGCAGCCGGA CGATGCGCAT TCGGTGGAAG GCTTTCGCGG CGCGCGTTTC
TCGCGCAGCC GGCACTGCCT GCCGGCCATC GTCGAGCGGG TGTGGCAGGG GCGCGAGGCG
GCCAAGCGCG ACGGCAACGC CGCGCTGTCG CAGGCGCTGA AGATCATCAT GAACGCCTTC
TACGGCGTGC TCGGCTCCAG TGGCTGCCGC TTCTTCGACC CGCGCCTGGC CTCGTCCATC
ACCCTGCGCG GGCATCAGAT CATGCGCCGC ACCCGCGAGC TGATCGAGGC CGAGGGCCAT
GCGGTGATCT ACGGCGACAC CGACTCCACC TTCGTCTGGC TCGGCCGCGC CCACGACGAG
GCCGAGGCGG CGCAGATCGG CCGCGCCCTG GTAGCCAGGG TCAATGCCTG GTGGCGCGAG
CATCTAGCAG ATGAGTACGG CCTGACCAGC GCCCTGGAGC TGCAGTTCGA GACCCATTAC
CGGCGCTTTC TCATGCCCAC CATTCGCGGC ACCGAGGAGG GCAGCAAGAA GCGCTACGCC
GGCCTGGTAA GGGCGGCGGA TGGCAGCGAA CGCATGGTGT TCAAGGGGCT GGAGACGGTA
CGCAGCGACT GGTCGCCGCT GGCTCAGCGC TTTCAGCAGG AGCTGTACCG CCTGGTGTTC
GCCGGCCAGC CCTATGCGGA CTACGTGCGC GACTACGTCA AACGCACCCT GGCCGGCGAG
CTGGACGAGC TGCTGGTCTA TCGCAAACGC CTGCGCCGCC GCCTCGACGA CTACCAGCGC
AACGTGCCGC CGCACGTGCG CGCCGCACGC AGCGCCGACG AACACAACCA GCGCCTCGGC
CGGCCGCTGC AGTACCAGCG CGGCGGCTGG ATCAGCTACC TGATCACCAC CACCGGGCCG
CAACCGCTGG AACGCCTGCT GTCGCCCATC GACTACGAGC ACTACCTGAG CCGCCAGCTC
AAGCCGGTGG CCGACGCCAT CCTGCCCTTC GTCGGCGGCG ATTTCGAGCG GCTGGTGGAC
GGACAGCTGG GCCTTTTCTA G
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| Protein sequence | MAVQQGFVLS RHWRDTPQGT EVAFWLATDA GPIQVRLPVQ PSVAFIPAEQ RAWAEPLLAG
EQGAELRELA LRDFRQRPVL GLYCQQYRQL LQLEKKLRQA GVDVYEADIR PPDRYLMERF
ITASVTFEGV EQQDGSLLCK SLKAAADYRP ALRLVSLDIE TSARGELYSI ALEGCGQRQV
YMLGPANGDA SGVDFELQFC DSRKALLERL NDWLARFDPD AIIGWNLVQF DLRVLRDHAE
QLKVPLRLGR GGDVMGWRQH NSSQHYFAEA AGRLIIDGIE ALRSATWSFP SFSLESVAQT
LLGEGKAIDT PYARMDEIQR MFDEDKPALA RYNLKDCELV TRIFAHTDLL AFLLERSSVT
GLAADRSGGS VAAFTHLYLP PMHRLGFVAP NLGDIRGENS PGGFVMDSRP GLYDSVLVLD
YKSLYPSIIR SFLIDPVGLV EGLQQPDDAH SVEGFRGARF SRSRHCLPAI VERVWQGREA
AKRDGNAALS QALKIIMNAF YGVLGSSGCR FFDPRLASSI TLRGHQIMRR TRELIEAEGH
AVIYGDTDST FVWLGRAHDE AEAAQIGRAL VARVNAWWRE HLADEYGLTS ALELQFETHY
RRFLMPTIRG TEEGSKKRYA GLVRAADGSE RMVFKGLETV RSDWSPLAQR FQQELYRLVF
AGQPYADYVR DYVKRTLAGE LDELLVYRKR LRRRLDDYQR NVPPHVRAAR SADEHNQRLG
RPLQYQRGGW ISYLITTTGP QPLERLLSPI DYEHYLSRQL KPVADAILPF VGGDFERLVD
GQLGLF
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