Gene Pmen_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3568 
Symbol 
ID5106115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3935855 
End bp3936484 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content66% 
IMG OID640504821 
ProductYheO domain-containing protein 
Protein accessionYP_001189048 
Protein GI146308583 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.634176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.263492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC GCCCCGCCGC CGACCTCGAC AACTACCGCG CCATCGCCGA CGCCATCGCC 
ACCCTGTTCT TCCCCCATGC CGAGGTGGTG CTGCACGACC TGCGCACGCA GAAGATCGAC
CATATCGCCA ACAACATCTC CAAGCGCGCG GTGGGCGATG ACGCCGCCCT CGAAGACATG
CTCGACGACG CCGGCGACGC GCGCAACATC GGCCCCTACG AGAAGCTCAA CTGGGACGGG
CAGAAGATCC GCTCGGTCAG CAGCGTGCTG CGCGATGCCG GCGGCAAGCC GGTCGCGCTG
CTGTGCATCA ACCTCAATAT TTCGCTGTTC GAGAGCGCCC GTCAGGCACT CGACCTGTTC
CTCTCGGCGA ACAAGCTGAT CCCCCAGCCC GACGCGCTGT TTCGCGACGA CTGGCAGGAA
CGTATCAACA CCTTCCTCCA CGCCTGGCTG CGCCAGCGCC AGCTCGGCCT CAACCTGCTG
ACCCGCGAGC ACAAGCGCGA ACTGGTCGAG GCGCTGCACG CCGAAGGCGC GTTCAAGGGC
AAGAGCGCCG CCAACTACGT GGCCAACGTG CTGAACATGG GCCGGGCGAC GGTGTACAAG
CACCTCAAGG AAATCAAGGG CGAGGGCTAG
 
Protein sequence
MTPRPAADLD NYRAIADAIA TLFFPHAEVV LHDLRTQKID HIANNISKRA VGDDAALEDM 
LDDAGDARNI GPYEKLNWDG QKIRSVSSVL RDAGGKPVAL LCINLNISLF ESARQALDLF
LSANKLIPQP DALFRDDWQE RINTFLHAWL RQRQLGLNLL TREHKRELVE ALHAEGAFKG
KSAANYVANV LNMGRATVYK HLKEIKGEG