| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3565 |
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| Symbol | |
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| ID | 5106112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3931851 |
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| End bp | 3933299 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504818 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_001189045 |
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| Protein GI | 146308580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.36909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAAAG CACTCAAGAA AATGTTCGGC AAAGCCGAAG ACGAGCAGCC ACAACCAGCG
CCGTCACCCG CAACAGCGCC CGCCCAGAGC CGTGGCGCAG ACGACAAGCG TCCCCGCAAG
AACAAGCCCG CCCGCCCAGC CAGCGAGACT GCGAGCGACA GCCCCGCGCC ACAGCAGCCT
CGCCCGCCCA AGGCCGACAA ACCGCGCCGC GAGCGCCCGG CCAAGCCGGT GGACAACTGG
AAGCTGGAAG ACTTCGTGGT CGAGCCGGCC GAAGGCAAGA CGCGCTTCCA CGACTTCAAG
CTCGCCCCCG AGCTGATGCA CGCCATCCAC GACCTCGGCT TCCCCTACTG CACGCCGATC
CAGGCCGGCG TACTGGGTTA CACCCTCAAG GGCCAGGACG CCATCGGCCG CGCCCAGACC
GGCACCGGCA AGACCGCCGC CTTCCTCATC TCGATCATCA CCCAGCTGCT GCAGACGCCG
CCGCCGAAGG AACGCTACAT GGGCGAGCCG CGCGCGCTGA TCATCGCGCC GACCCGCGAG
CTGGTGGTGC AGATCGCCAA GGACGCCGTC GCGCTGACCA AGTACACCAA GCTCAACGTG
ATGAGCTTCG TCGGCGGCAT GGACTTCGAC AAGCAGCTCA AGCAGCTCGA ATCGCGTTTC
TGCGACATCC TGGTCGCCAC CCCGGGCCGC CTGCTGGACT TCAACCAGCG CGGCGAGGTG
CACTTGGACA TGGTCGAGGT GATGGTGCTG GACGAAGCCG ACCGCATGCT CGACATGGGC
TTCATCCCGC AGGTGCGCCA GATCATCCGC CAGACGCCGA TGAAGGGCGA CCGCCAGACC
CTGCTGTTCT CCGCCACCTT CACCGAAGAC GTGATGAACC TGGCCAAGCA ATGGACGGTC
AACCCGGCCA TCGTCGAGAT CGAGCCGGAG AACGTCGCCA GCGACACCGT GGAGCAGCAC
GTCTACGCCG TGGCCTCCAG CGACAAGTAC AAACTGCTGT ACAACCTGGT GACGCAGAAC
GCCTGGGACC GGGTGATGGT CTTCGCCAAT CGCAAGGACG AAGTGCGCCG CATCGAGGAG
CGCCTGACCC GCGACGGCGT CAGCGCCGCG CAGATGTCCG GCGACGTGCC GCAACACAAG
CGCATCAAGG TGCTCGAAGG CTTCCGCGCC GGGCATATCC GCGTGCTGGT GGCCACCGAC
GTGGCCGGCC GCGGCATTCA CGTCGACGGC ATCAGCCACG TGATCAACTT CACCCTGCCG
GAAGACCCGG ACGACTACGT GCACCGCATC GGCCGTACCG GCCGTGCCGG CAGCAGCGGC
ACCTCGATCA GCTTCGCCGG CGAGGACGAC GCCTTCGCCC TGCCGCCGAT CGAAGCGCTG
ATCGGCCGCA AGATCCAGTG CGAGATGCCA CCGGATGAGC TGCTCAAGCC GGTACCACGC
AAGCACTGA
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| Protein sequence | MLKALKKMFG KAEDEQPQPA PSPATAPAQS RGADDKRPRK NKPARPASET ASDSPAPQQP
RPPKADKPRR ERPAKPVDNW KLEDFVVEPA EGKTRFHDFK LAPELMHAIH DLGFPYCTPI
QAGVLGYTLK GQDAIGRAQT GTGKTAAFLI SIITQLLQTP PPKERYMGEP RALIIAPTRE
LVVQIAKDAV ALTKYTKLNV MSFVGGMDFD KQLKQLESRF CDILVATPGR LLDFNQRGEV
HLDMVEVMVL DEADRMLDMG FIPQVRQIIR QTPMKGDRQT LLFSATFTED VMNLAKQWTV
NPAIVEIEPE NVASDTVEQH VYAVASSDKY KLLYNLVTQN AWDRVMVFAN RKDEVRRIEE
RLTRDGVSAA QMSGDVPQHK RIKVLEGFRA GHIRVLVATD VAGRGIHVDG ISHVINFTLP
EDPDDYVHRI GRTGRAGSSG TSISFAGEDD AFALPPIEAL IGRKIQCEMP PDELLKPVPR
KH
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