| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3521 |
|---|
| Symbol | queA |
|---|
| ID | 5105989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3880189 |
|---|
| End bp | 3881232 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640504773 |
|---|
| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| Protein accession | YP_001189001 |
|---|
| Protein GI | 146308536 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
|---|
| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.307107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTG CCGATTTCCA CTTCGATCTT CCCGAGTCGC TGATCGCCCG TCATCCCCTG
GCCGAGCGCC GAGCCAGTCG CCTGTTGCAG CTGGATGGGC CGAGCGGGGC GCTGCGTCAT
GGCCAGTTCA CCGATCTGCT GGAGCAACTG CGCCCCGGTG ACCTGATGGT GTTCAACAAC
ACCCGGGTGA TTCCGGCGCG CCTGTTCGGC CAGAAGGCGT CCGGCGGCAG GCTGGAAGTG
CTGGTGGAGC GCGTGCTCGA TCAGCATCGG GTGCTGGCGC ACGTGCGCTC CAGCAAGTCG
CCCAAGCCCG GTTCGCAGAT CCTCATCGAG GGTGGCGGCG AAGCCGAAAT GGTCGCCCGC
CACGATGCCC TGTTCGAGCT GCGTTTCGCC GAACCGGTGC TGCCGTTGCT GGAGCGGGTC
GGGCATATGC CGCTGCCGCC TTATATAGAC AGACCGGATG ACGAGGCCGA CCGCGAGCGT
TATCAGACCG TCTACGCCGA GAAGGCGGGC GCGGTGGCGG CGCCCACCGC GGGGCTGCAC
TTCGATGACG AACTGCTGGC GGCGATCCGC GCCAAGGGTG TGGAAACAGC GTTCGTGACG
CTGCATGTCG GTGCCGGTAC TTTCCAGCCG GTGCGGGTCG AGCGCATCGA AGATCACCAC
ATGCACAGCG AGTGGCTGGA GGTCAGCCAG GAGGTCGTCG ATGCCGTGGC GGCCTGCCGC
GCCCGTGGCG GTCGTGTGGT CGCCGTCGGC ACCACCAGCG TGCGCTCCCT GGAAACCGCG
GCGCAGAGCA GCGAGTTGAA GCCGTTCAGC GGCGATACCG ACATCTTCAT CTACCCGGGC
CGACCCTTCC ATGTGGTCGA CGCCCTGGTC ACCAACTTCC ACCTGCCCGA GTCGACCCTG
CTGATGCTGG TGTCGGCCTT CGCCGGCTAC GCCGAGACCA TGGCCGCCTA TCGCGCGGCG
GTGGAGCAGG GCTATCGCTT CTTCAGTTAC GGTGATGCCA TGTTCATCAC CCGCAACCCC
GCCGCGCGCG GGCCCGAGGT TTGA
|
|---|
| Protein sequence | MRVADFHFDL PESLIARHPL AERRASRLLQ LDGPSGALRH GQFTDLLEQL RPGDLMVFNN
TRVIPARLFG QKASGGRLEV LVERVLDQHR VLAHVRSSKS PKPGSQILIE GGGEAEMVAR
HDALFELRFA EPVLPLLERV GHMPLPPYID RPDDEADRER YQTVYAEKAG AVAAPTAGLH
FDDELLAAIR AKGVETAFVT LHVGAGTFQP VRVERIEDHH MHSEWLEVSQ EVVDAVAACR
ARGGRVVAVG TTSVRSLETA AQSSELKPFS GDTDIFIYPG RPFHVVDALV TNFHLPESTL
LMLVSAFAGY AETMAAYRAA VEQGYRFFSY GDAMFITRNP AARGPEV
|
|---|
| |