| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3516 |
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| Symbol | |
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| ID | 5105984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3875155 |
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| End bp | 3875697 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504768 |
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| Product | hypothetical protein |
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| Protein accession | YP_001188996 |
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| Protein GI | 146308531 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3134] Predicted outer membrane lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.672109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT CGATGCTGGT AGGTGCCGTG CTGGGCGCGG TGGGTGTTAC GGCAGGTGGC
GCGGTCGCTA CTTACAGTCT GGTGGATCGT GGTCCGTCCT ATGCCGAGGT GCTGGCGGTG
ACCCCGGTCA AGGAAACCAT CAAGACCCCG CGTGAAGTGT GCAAGGACGT CACCGTAACG
CGTCAGCGAC CGGTGCAGGA TCAGCACCAG ATCGCCGGTA CCGCCATTGG TGCCATTGCG
GGTGGTCTGC TGGGCAATCA GGTCGGTGGC GGCAGCGGCA AGAAGATTGC CACGGTGGCC
GGTGCGGTCG GTGGCGGCTA TGCCGGCAAC AAGATTCAGG AAGGCATGCA GCAGCGCGAT
ACCTATACCA CCACGGAAAC CCGCTGCAAT ACCGTGACCG ATACCAGCGA AAAGCTGGTG
GGTTACGACG TGAAATACCA GGTGGGCGAG AAGATCGGCA CGGTGCGCAT GGATCGTGAT
CCGGGCAGCC AGATTCCGCT GAACAAGCAG GGTGAGCTGG TGCTGGTGCA GCAGACTCAG
TAA
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| Protein sequence | MNKSMLVGAV LGAVGVTAGG AVATYSLVDR GPSYAEVLAV TPVKETIKTP REVCKDVTVT
RQRPVQDQHQ IAGTAIGAIA GGLLGNQVGG GSGKKIATVA GAVGGGYAGN KIQEGMQQRD
TYTTTETRCN TVTDTSEKLV GYDVKYQVGE KIGTVRMDRD PGSQIPLNKQ GELVLVQQTQ
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