Gene Pmen_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3494 
Symbol 
ID5105962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3855411 
End bp3856193 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID640504746 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001188974 
Protein GI146308509 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA AACCCGACCT TGAACTGGCG CTGGTCCAGA CCGGCCTGGC CTGGCACGAT 
CCGGCCGCCA ACCGCGAGCA CTTCCAGGCC TTGCTGCAGC AGGCGCGTGG CGCCGATCTG
GTGATCCTGC CGGAGATGTT TTCCACCGGC TTTTCCATGG ACTCGGCCGA ACTGGCCGAG
CCCGAGAACG GCCCGACCAC GCTCTGGTTG CGCGAGCAGG CGCAGGCTAT CGGCGCGGTG
ATCTGCGGCA GCCTGATCAT CCAGGCGGCC GATGGCAGCT ACCGCAACCG CCTGCTCTGG
GCGCGACCGG ATGGTTCGCT GGCGCATTAC GACAAGCGCC ATCTGTTTCG CATGGCCGGC
GAGCACAAGC ATTACAGCGC CGGTGATCAG CAGGTGGTGC TGGAGCTGAA CGGCTGGCGC
GTGCGCCCGC TGATCTGCTA CGACCTGCGC TTCCCGGTGT GGAGTCGCGA TGCCGGCGGT
ACCGATCTGC TCATTTATAC CGCCAACTGG CCCGGCGCTC GCCGCCAGTA CTGGAATCGC
CTGCTGCCGG CGCGGGCCAT CGAGAACCTG TGCTATGTCG CGGCTGTGAA CCGCATCGGC
GAGGACGGCA AGGGCCACGG GTATACTGGC GATTCCCAGG TGCTGGATTT CCAAGGCGAG
GCGCTGCTGG CGGCGGGTGA TGGTGATGGT GTGTTCCGCG CCCGGCTGTC GAGCGAGGCA
CTGGCTGCCT ACCGCGAGCG CTTCCCCGCA CACCTGGATG CCGATACCTT CACCTTGAGC
TGA
 
Protein sequence
MSEKPDLELA LVQTGLAWHD PAANREHFQA LLQQARGADL VILPEMFSTG FSMDSAELAE 
PENGPTTLWL REQAQAIGAV ICGSLIIQAA DGSYRNRLLW ARPDGSLAHY DKRHLFRMAG
EHKHYSAGDQ QVVLELNGWR VRPLICYDLR FPVWSRDAGG TDLLIYTANW PGARRQYWNR
LLPARAIENL CYVAAVNRIG EDGKGHGYTG DSQVLDFQGE ALLAAGDGDG VFRARLSSEA
LAAYRERFPA HLDADTFTLS