| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3490 |
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| Symbol | xseA |
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| ID | 5105958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3850465 |
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| End bp | 3851895 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504742 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_001188970 |
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| Protein GI | 146308505 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.655561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATG AAGGTCGCGC CGACGCCCCT CTCGACTTAT CATGCGCCCC CATGATCAAC
GATCCCTTTG CTCGCCTGAA CCTCGACCGC GAGGTGCTCA GCGTCAGCCA GCTCAACAAC
CGCGCCCGCC TGCTGCTGGA GGACGTGTTC TCCGGCATCT GGGTCGAGGG GGAAATCTCC
AACCTCGCCC GTCCCGCGTC CGGCCATGTC TACTTCACCC TGAAAGACAG CCAGGCCCAG
GTGCGCTGCG CGCTGTTCCG GCAGAACGCC GCCCGCGTGC GCCAGGCGCT GCGCGATGGA
CTGGCGGTGA AAGTACGCGG CAAGGTCTCG CTGTTCGAAG GGCGCGGCGA CTACCAGCTG
ATTCTCGATG CGGTCGAGCC GGCCGGCGAC GGCGCCCTGC GCCTGGCGTT CGAGGCGCTG
AAGGAAAAAC TCGGCGCCGA AGGGCTGTTC TCCACCGAAC GCAAGATCGC CTTGCCCGCC
CATCCCAGGC GCATCGGCAT CATCACCTCG CCCACCGGCG CGGTGATCCG CGACATCATC
AGCGTGTTCC GCCGCCGCGC GCCACAGGTG GAACTGAACC TGATACCCAC CGCCGTGCAG
GGTCGCGAAG CCACCGCGCA GATCGTGCGC GCCCTGCAAC GGGCCGATGC GCTGGGTTTC
GATGCATTGA TCCTGGCCCG CGGCGGCGGT TCGCTGGAAG ACCTCTGGTG CTTCAACGAG
GAAAGCGTGG CGCGCGCCGT GGCGGCCTGC GTCACGCCCA TCGTCAGCGC CGTGGGCCAC
GAGACGGACG TGTCCATCGC CGACTTCGTC GCCGACGTGC GCGCGCCGAC GCCGTCGGCC
GCCGCCGAAC TGCTGGCCCC GGACAGCAGC GAGCTGGTGC AGCGCCTGCA CAACCTGCAG
CGCCGCCTGG TGTTGCACAT GCAGGGCCGC CTGGCCCGCG AGCGCCTGCG TCTGGACGGC
GTCAGCCGGC GCCTGCGCCA CCCCGGCGAA CGCCTGCGCC AGCAGGCCCA GCGCCTGGAC
GATCTAGACA TGCGCCTGCG CCGCGCCTTC GCCCAGCGGC TGGCGAACCA GTACGAACGC
CTGGCGCGCC TCGACGCCCG CCTCGCCGCA CAGCATCCAG GGCGCAACCT GGCCCTGCTG
CGCCAGCGCC TCGACGGCCT GGCCGCGCGC CTGCCACGTG CCATGCAGGG ACAGCTGCGC
AGCCAGCGCC AGCAACTGGG CGCACTGGCG GCGCAATTGC AGATCGTCAG CCCCCTGGCC
ACGCTCGGCC GCGGTTACAG CATTCTCCTC GACGAGCGCG GCCAGGCCGT GCGCAGCGCC
GCCCAGACCC AACCAGGCCA GCGCCTCAAG GCGCGCCTGA GCGAGGGCGA GCTGGACGTG
CGCGTCGAGG ACAACCACAT ACAACCGGCG ACGCTGTCGC TGCTGGACTG A
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| Protein sequence | MLDEGRADAP LDLSCAPMIN DPFARLNLDR EVLSVSQLNN RARLLLEDVF SGIWVEGEIS
NLARPASGHV YFTLKDSQAQ VRCALFRQNA ARVRQALRDG LAVKVRGKVS LFEGRGDYQL
ILDAVEPAGD GALRLAFEAL KEKLGAEGLF STERKIALPA HPRRIGIITS PTGAVIRDII
SVFRRRAPQV ELNLIPTAVQ GREATAQIVR ALQRADALGF DALILARGGG SLEDLWCFNE
ESVARAVAAC VTPIVSAVGH ETDVSIADFV ADVRAPTPSA AAELLAPDSS ELVQRLHNLQ
RRLVLHMQGR LARERLRLDG VSRRLRHPGE RLRQQAQRLD DLDMRLRRAF AQRLANQYER
LARLDARLAA QHPGRNLALL RQRLDGLAAR LPRAMQGQLR SQRQQLGALA AQLQIVSPLA
TLGRGYSILL DERGQAVRSA AQTQPGQRLK ARLSEGELDV RVEDNHIQPA TLSLLD
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