Gene Pmen_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3445 
Symbol 
ID5105915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3801908 
End bp3802240 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content62% 
IMG OID640504699 
Producthypothetical protein 
Protein accessionYP_001188927 
Protein GI146308462 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATACC ATAATACCGT ATTAACCGAA GCCTGGACGA CCACCATGAA GGCCTACTGG 
ATTGCCCACG TCGATGTCAC CGACCCTGCT CGATACGCCG AATACACCAG CCGTGCCCCT
GCGGTGTTCG CCCACTTCGG TGGTCGACTG CTGGCCCGCG GCGGTCGCAG CGAAGCGCTG
GAGGGCAGAG CCACGCCGCA GCGCAGTGTG GTGATCGAGT TCGAGTCCTA TGAACAGGCG
CTGGCCTGCT ACCGCTCTGC GCAATACCAG GCGGCCTGCG CCCATCGCGT GGGCGCTGCG
CAGGCTGAAG TAATCATAGT CGAGGGCATC TAG
 
Protein sequence
MVYHNTVLTE AWTTTMKAYW IAHVDVTDPA RYAEYTSRAP AVFAHFGGRL LARGGRSEAL 
EGRATPQRSV VIEFESYEQA LACYRSAQYQ AACAHRVGAA QAEVIIVEGI