Gene Pmen_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3395 
Symbol 
ID5105867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3752160 
End bp3752885 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID640504651 
Productprotein-disulfide isomerase-like protein 
Protein accessionYP_001188879 
Protein GI146308414 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.739792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA CCCGTATTCC CGTTGCCCTG GCCCTGCTGC TGGGCAGCGG TATCACCCTG 
GCTGCCGATC CCGATCAGGC CATCCGCCAG AGCCTGACTT CGCTGGATGC CAGCCTGCCG
ATCGAGGCCA TCGCCGAGAG CCCGATGCCG GGCATCTATC AGGTTCAGCT CAAGGGTGGG
CGCCAGCTCT ACACCAGCGC CGACGGCCAG TTCCTGATCC AGGGTTACCT GTTCCAGGTC
AAGGATGGCC AGGCGGTCAA TCTCACCGAG ATCGAAGAGA GCCGTGCGGT GGCCAAGCAG
ATCAATTCCG TTCCGGCCAA GGAGATGGTG GTGTTCGCGC CCAAGGCGCC GAAAACCCAT
ATCACCGTCT TCACCGACAC CGACTGCGGT TATTGCCAGA AGCTGCACAG CGAAGTGCCG
GAGCTCAATC GCCTGGGCGT CGAGGTGCGT TATCTGGCCT TCCCGCGCCA GGGTCTTAAC
AGCCCGGCAG CGAAGGAGCT GGTCAACGTC TGGTGCGCCA AGGATCAGCA GGACGCCATG
AACCGCGCCA AGACCCGCCA GAGCGTAGCC GATGCGACCT GTGACAATCC GGTGGCCAAG
CAGTACCAAC TGGGCCAGAT GATCGGGGTC AACGGCACGC CGGCCATCGT GCTGGCCAAC
GGCAAGATGA TTCCGGGTTA TCAGCCGGCG CCGCAGCTGG CCAAAATTGC GCTGGAGTCG
AACTAA
 
Protein sequence
MSLTRIPVAL ALLLGSGITL AADPDQAIRQ SLTSLDASLP IEAIAESPMP GIYQVQLKGG 
RQLYTSADGQ FLIQGYLFQV KDGQAVNLTE IEESRAVAKQ INSVPAKEMV VFAPKAPKTH
ITVFTDTDCG YCQKLHSEVP ELNRLGVEVR YLAFPRQGLN SPAAKELVNV WCAKDQQDAM
NRAKTRQSVA DATCDNPVAK QYQLGQMIGV NGTPAIVLAN GKMIPGYQPA PQLAKIALES
N