Gene Pmen_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3368 
Symbol 
ID5105840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3717039 
End bp3717590 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content63% 
IMG OID640504624 
Producthypothetical protein 
Protein accessionYP_001188852 
Protein GI146308387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0179513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCT GGCGCGTACT GGTCGCCTTG TCCTTCCTGT TGTTGAGTGG TTGTCTGGTT 
ACTTTCAAGG ACCCGATCCC GGCCAACGAA GCCGCGCCGA TTCCGCTGCT GGGCGAATGG
ACCCGCCAGG ACGAATGGGG CGATCAGCTC TATCTGGAAA TCACCCGCGC CGGCTCCAAC
CTGTACCAGG CGCGCGTCTA CGAAGGCAGC CCGGACAACC TCGACAGCCT CGAGGAGTTC
GGTTTCACCG TGGCCCATCA TGGCCGCCGC TGGTACCTGT CGGCCGGTCT GCCGAAGAGC
CTGGGCGCCA ACTTCGCCAT CGCCGGTTTC GAGCTGACTA AGAGCAACGA ACTGGTGCTG
TACAACCTCG ATAGCGAGCG CATCCTGCAG GACATGGAAA AGGGCCTGCT GGAGGGCGAA
ACCGTCGACA TGCCCGAAGG TGACGGCGCA CTCATCACCA GCCCGCTGGA CAAGGTATTC
GCCTATCTCG ACGACCCGGC CAACGCCGAC CTGTTCGTCG AGGTGGCGCG CTATCAGCGG
GCCGCCGAGT AG
 
Protein sequence
MKAWRVLVAL SFLLLSGCLV TFKDPIPANE AAPIPLLGEW TRQDEWGDQL YLEITRAGSN 
LYQARVYEGS PDNLDSLEEF GFTVAHHGRR WYLSAGLPKS LGANFAIAGF ELTKSNELVL
YNLDSERILQ DMEKGLLEGE TVDMPEGDGA LITSPLDKVF AYLDDPANAD LFVEVARYQR
AAE