| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3366 |
|---|
| Symbol | |
|---|
| ID | 5105838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3714914 |
|---|
| End bp | 3715660 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640504622 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001188850 |
|---|
| Protein GI | 146308385 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2013] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.113587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGCC ATCAACTCGA CTACGAAATC CTCGGCGCCT CGGCGCAATC GGTAGAGATC
GTCCTCGACC CCGGTGAGAC GGTGATCGCC GAGGCCGGCG CGATGAACTA CATGACCGAC
GGCGTGCGTT TCGAAACGCG CATGGGCGAC GGCTCCTCCA GCGGTCTGCT GGGCAAGCTG
TGGAGCGCCG GCAAGCGCAT GCTTACCGGC GAGTCGCTGT TCATGACCCA TTTCAGCAAT
GGCGGGAAGA CCCAGGCGCG GGTCGCCTTC GCCGCGCCCT ATCCCGGCAC CGTGGTGCCC
ATCGACCTGG CGCAGGTCGG CGGACGGCTG ATCTGCCAGA AGGATGCCTT TCTCTGCGCC
GCTCATGGCA CCAGCATCGG CATCAGCTTC GCCAAGCGCA TCGGTGCCGG CTTCTTCGGT
GGCGAGGGTT TCATCCTGCA GAAGCTCGAA GGCGACGGCC TGGCCTTCGT GCACGCCGGC
GGCACGGTGA TCCGCAAGGA GCTGAACAAC GAGACCCTGC GCCTGGACAC CGGCTGCCTG
GTGGCTTTCA GCAGCGGTAT CGACTACGAC ATCGCCCTGG CTGGCGGCCT CAAGAGCATG
CTGTTCGGCG GCGAAGGCCT GCTGCTGACC ACGCTCAAGG GCACCGGCAC GGTGTGGATC
CAGAGCCTGC CGTTCTCACG CCTGGCCGAG CGGGTGTATG CCGCGACCGT CCAGGCCCGC
GAAGAGGTGC GTGCCGGTGG CAAGTAA
|
|---|
| Protein sequence | MPSHQLDYEI LGASAQSVEI VLDPGETVIA EAGAMNYMTD GVRFETRMGD GSSSGLLGKL
WSAGKRMLTG ESLFMTHFSN GGKTQARVAF AAPYPGTVVP IDLAQVGGRL ICQKDAFLCA
AHGTSIGISF AKRIGAGFFG GEGFILQKLE GDGLAFVHAG GTVIRKELNN ETLRLDTGCL
VAFSSGIDYD IALAGGLKSM LFGGEGLLLT TLKGTGTVWI QSLPFSRLAE RVYAATVQAR
EEVRAGGK
|
|---|
| |