Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3363 |
Symbol | |
ID | 5105835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3712850 |
End bp | 3713635 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640504619 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001188847 |
Protein GI | 146308382 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAC ACGTGATGAT CCCCGCCCTT CTGGCCCTGA GCGTCGGCCT GGCCGCCTGC TCGCACCAGC CCAATGCCAA TCTGGAATCG GCTCGCAACA ACTTCTCCAC GCTGCAAAGC GACCCGCAGT CGAACAAGCT GGCGGCGCTG GAAACCAAGG AAGCCCAGGA ATGGCTGAAC AAGGCCGACA AGGCCTACAT GGAGCGTGAC GACGAGAAGA AGGTCGACCA GCTGGCCTAC CTGACCAACC AGCGCGTCGA GGTGGCCAAG CAGACCATCG CCCTGCGCGC CGCCGAGAAC GAGCTGAAGA ACACCTCGGC GCAACGCGCC AAGGCACTGC TCGATGCCCG CGACGCGCAG ATCCGCAAGC TGCAGGACAG CCTCAACGCC AAGCAGACCG AGCGCGGCAC CCTGGTGACC TTCGGTGACG TGCTGTTCGA CTTCAACAAG GCCGAACTCA AGAGCAGCGC GCTGCCCAAC GTCACACAAC TGGCGCGCTT CCTCCAGGAA AATCCCGAGC GTCAGGTGAT CGTCGAGGGC TACACCGACA GCGTCGGCTC GGCCAGCTAC AACCAGGGCC TGTCCGAGCG CCGCGCCGAG TCCGTACGCC GCGCACTGAT CCGTGCCGGT GTCGAGCCGA CGCGCATCGT CGCCCAGGGC TACGGCAAGG AGTATCCGGT AGCGGACAAC TCCAGCGACT CGGGCCGCGC GCAGAACCGT CGGGTGGAGG TGACCATCTC CAACGACAAC CAGCCGGTGG CACCGCGCTC CTCGGCCGGC GCCTGA
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Protein sequence | MRKHVMIPAL LALSVGLAAC SHQPNANLES ARNNFSTLQS DPQSNKLAAL ETKEAQEWLN KADKAYMERD DEKKVDQLAY LTNQRVEVAK QTIALRAAEN ELKNTSAQRA KALLDARDAQ IRKLQDSLNA KQTERGTLVT FGDVLFDFNK AELKSSALPN VTQLARFLQE NPERQVIVEG YTDSVGSASY NQGLSERRAE SVRRALIRAG VEPTRIVAQG YGKEYPVADN SSDSGRAQNR RVEVTISNDN QPVAPRSSAG A
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