Gene Pmen_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3295 
Symbol 
ID5106802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3637278 
End bp3638054 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID640504552 
ProductAzlC family protein 
Protein accessionYP_001188780 
Protein GI146308315 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA ACGTTCAAGA CCTGCCTGGG GCTGCTTGGT TAAGCTGGTC GGCCCAAGGA 
GGTTCCATGT CCCGTCATCA CGAATTCACC CAGGGCGCCC GCGATATGCT GCCGATGCTG
CTGGGCGCCA TTCCCTTCGG CATCATCTTC GGCAGCCTGG CCGGCGCTGC CGGGCTCAGC
CCGCTGCAGA CGATGGGGAT GTCGGCGCTG GTGTTCGCCG GTTCGGCGCA GTTCATCGCC
ATCAGCCTGC TGGCCGGCGG TGCCGGTGTG GCCGTGGTGC TGCTGACCAC CCTGGTGGTC
AATCTGCGCC ATGCCCTGTA CAGCGCCAGC CTGCAGCCCC ATGTGCGTCA CCTGCCCAAG
CGCTGGCGCG TGCCACTGGC GTTCTGGCTG ACCGACGAGG CCTATGCGGT CGTGCTGCAG
CGCTACGCGC GGGGCGATTC GGCGCCGTTG CGTCACTGGT ACTTTCTCGG CGCGGCGCTG
GCGATGTACT GCAACTGGCT GCTGTGCACC CTGGTCGGCG TGCTGTTCGG CCAGGCGGTG
CCGAACATCG GCGAGTGGGG GCTGGACTTT GCCATGCTGG CGACCTTCAT CGGCATCGTC
GTGCCCATGC TGCGCAACCA GCCGCAGGTG GCTGCTGCGC TGGTCGCCGC CGCCGTGGCG
CTGGCTTGCC ATGCGCTGCC GTACAAGCTC GGGCTGATGG CCGCGGCCGC CAGTGGCATC
GTGGTCGGCG TGTGGCTGGA GCGGCGCACG CCGGTCCTGC AGGAGGAGAT GCTCTGA
 
Protein sequence
MRKNVQDLPG AAWLSWSAQG GSMSRHHEFT QGARDMLPML LGAIPFGIIF GSLAGAAGLS 
PLQTMGMSAL VFAGSAQFIA ISLLAGGAGV AVVLLTTLVV NLRHALYSAS LQPHVRHLPK
RWRVPLAFWL TDEAYAVVLQ RYARGDSAPL RHWYFLGAAL AMYCNWLLCT LVGVLFGQAV
PNIGEWGLDF AMLATFIGIV VPMLRNQPQV AAALVAAAVA LACHALPYKL GLMAAAASGI
VVGVWLERRT PVLQEEML