Gene Pmen_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3282 
Symbol 
ID5106789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3629417 
End bp3629884 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID640504539 
Producthypothetical protein 
Protein accessionYP_001188767 
Protein GI146308302 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCAC GCGCCCGCCA GCTGATCGAC AGCCTGGAAC TCCAGGCGCA TCCCGAGGGC 
GGCTTCTACC GGCGCTTGTT CGTGTCCGCG CAGCGCGACG CGCGGGGCAG GGCGGCGTCC
AGCGCCATCC TCTTCCTGCT GCCGGCCGGG GCGGTCAGCC GCTGGCATCG GGTCGATGCC
GACGAACTCT GGCATTTTCA TGAAGGCGAT CCCCTGGAGC TGCTGGTGGC CGAATCGCCC
GAAAGCCTGC GGCGCGAGCT GCTGGGTCCG GTCGCTGCCG GACAGCTGCC GCAACGCGCC
GTACCGGCGC ATGCCTGGCA GGCAGCGCGC TGCACGGGCA GCTACAGCCT GGTGGGCTGC
ACCGTGGCGC CGGAGTTTCA GTTCGAGGGC TTCCGTCTGT TCGCCGACGA TGCGCAGGCG
CAGGCCCTGT GGCCGCGCCT GCTGAGCGAG CACGCCGAAC TGATCTGA
 
Protein sequence
MHPRARQLID SLELQAHPEG GFYRRLFVSA QRDARGRAAS SAILFLLPAG AVSRWHRVDA 
DELWHFHEGD PLELLVAESP ESLRRELLGP VAAGQLPQRA VPAHAWQAAR CTGSYSLVGC
TVAPEFQFEG FRLFADDAQA QALWPRLLSE HAELI