| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3277 |
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| Symbol | |
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| ID | 5106784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3625599 |
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| End bp | 3626510 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504534 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001188762 |
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| Protein GI | 146308297 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.362955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG CCATCCGTTT CGAAGATCAA GTGGTGATTG TCACCGGTGC CGGCGGTGGT
CTCGGCCGCG CGCATGCGCT GCTGTTCGCC CGCCATGGCG CCAGGGTAGT GGTCAACGAT
CTGGGTGGTA GCACGCACGG TGAAGGGGCC AACGCCTCGG CTGCCGACCG GGTGGTGGAA
GAGATTCGCG CCTTCGGTGG CACTGCGGTG GCCAACCACG ATTCGGTGAC CGACGGCGAC
AAGATCGTGC AGACCGCGCT CGATCATTTC GGCCGCATCG ACGTGCTGGT CAACAACGCC
GGCATCCTGC GCGACAAGAG TTTTCACAAG ATGGAAGACG CCGACTGGGA CCTGGTCTAC
AAGGTCCATG TCGAAGGCGC CTACAAGACC ACTCACGCTG CCTGGCCGCA TATGCGCGAG
CAGAACTACG GCCGGGTGAT CTTCACCTCG TCCACCTCCG GCATCTACGG CAACTTCGGC
CAGAGCAACT ACGGCATGGC CAAGCTCGGT CTCTATGGCC TGACCCGTAC CCTGGCCATC
GAAGGACGCA AGAACAACAT TCTGGTCAAC GCCATCGCCC CGACTGGCGC CACGCGCATG
ACCGAAGGGC TGATCCCGCC GCAGGTATTC GAGCAGCTCA AACCCGAACT GGTCAGCCCG
CTGGTGGTGT ACCTGGGCAG CCAGAACTGC CAGGACACCG GCGGCCTGTT CGAAGTCGGT
GGCGGCTGGG TCGGCAAGGT GCGCTGGGAG CGCAGCCTGG GCGTCGGTTT CGATCCCAAG
GCCGGTTTCA GCCCCGATGA CGTCGCCGCA CAGTGGCAGC GCATCTGTGA TTTCCAGGGC
GCCGCGCACC CGGCGGACAA CGTCGAGGCG CTCAAGGAAA TGATGGCGAA TCTGCAGAAG
TACGCCCTCT GA
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| Protein sequence | MSDAIRFEDQ VVIVTGAGGG LGRAHALLFA RHGARVVVND LGGSTHGEGA NASAADRVVE
EIRAFGGTAV ANHDSVTDGD KIVQTALDHF GRIDVLVNNA GILRDKSFHK MEDADWDLVY
KVHVEGAYKT THAAWPHMRE QNYGRVIFTS STSGIYGNFG QSNYGMAKLG LYGLTRTLAI
EGRKNNILVN AIAPTGATRM TEGLIPPQVF EQLKPELVSP LVVYLGSQNC QDTGGLFEVG
GGWVGKVRWE RSLGVGFDPK AGFSPDDVAA QWQRICDFQG AAHPADNVEA LKEMMANLQK
YAL
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