| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3247 |
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| Symbol | |
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| ID | 5106754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3598050 |
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| End bp | 3599138 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504504 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) |
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| Protein accession | YP_001188732 |
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| Protein GI | 146308267 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA AGCTGAAGTT ACCCCATACC CGTTATCTGG CGCCCGACGG TGCGCCCTGT
GCCGAGCTGC CGGCCTGGAG CGACGACTTC GACCTGCTCA TCCGTCTGTA CCGGCAGATG
CTGCTGACTC GCCTGTTCGA CCAGAAGGCG GTGGCGCTGC AGCGCACCGG GCGCATTGGT
ACCTACGCGC CGACCATCGG CCAGGAGGCC ATCGGTGTGG CCATCGGCGC GACCATGCAG
GCCGACGACG TGCTGGTGCC TTATTACCGC GACACCGCGG TGCAGGTGAT GCGCGGCGTG
CGCATGGAGG AGATCCTGCT CTATTGGGGC GGCGACGAGC GCGGCAGCGC CTATGTCGAC
CCGGCGGTGG CCGAGGACTT CCCGCTCTGC GTGCCCATCG CCACCCAGGC CCTGCATGCC
TGTGGCGTGG CCAGCGCGTT CAAGATCCGC GGTCAGCACC GCGTGGCGGT GACCACCTGC
GGCGACGGCG CCACCAGCAA GGGCGACTTT CTCGAGGCGC TCAACGTCGC CGGCGCCTGG
CAATTGCCGG TGGTGTTCGT GGTCAACAAC AACCAGTGGG CCATCTCGGT GCCGCGGCGC
ATCCAGTGCG GTGCGCCGAC CCTGGCGCAG AAGGCGCTCG GCGCCGGCTT TGCCGGTGAG
CAGGTCGATG GCAACGATGT GCTGGCAGTC TACGACCGCA TGCAGGTGGC GCTCGAACGT
GCGCGCCAGG GCAAGGGGCC GACCTTGATC GAATGCCTGA GCTACCGCCT GGGCGATCAC
ACCACCGCCG ACGACGCGAC GCGCTATCGC CCGGCCGAGG AGGTCAAGCA GGCCTGGCAG
GAGGAGCCGG TGGCGCGCCT GCAGGCTTTC CTGGTGCGCC AGGGCGTATG GAATGCGCAG
CGCGAGCAGG CCCTGGTCGG CGAATGCCAG GCCGAGGTGC AGCGCGCGGT GGAGGCCTTC
GAGGCGACCA CGCCGGCGCC AGTCGAGGAT GCGCTGGAGC ATGTCTACGG CAAATGGCCG
CAGGCCCTGG CCGAGCAGCG CGAATGGCTG CGCGAACGTG CCGCGCGGCG GGAGGTGGAC
CATGAGTGA
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| Protein sequence | MPDKLKLPHT RYLAPDGAPC AELPAWSDDF DLLIRLYRQM LLTRLFDQKA VALQRTGRIG
TYAPTIGQEA IGVAIGATMQ ADDVLVPYYR DTAVQVMRGV RMEEILLYWG GDERGSAYVD
PAVAEDFPLC VPIATQALHA CGVASAFKIR GQHRVAVTTC GDGATSKGDF LEALNVAGAW
QLPVVFVVNN NQWAISVPRR IQCGAPTLAQ KALGAGFAGE QVDGNDVLAV YDRMQVALER
ARQGKGPTLI ECLSYRLGDH TTADDATRYR PAEEVKQAWQ EEPVARLQAF LVRQGVWNAQ
REQALVGECQ AEVQRAVEAF EATTPAPVED ALEHVYGKWP QALAEQREWL RERAARREVD
HE
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