| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3227 |
|---|
| Symbol | |
|---|
| ID | 5106734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3570131 |
|---|
| End bp | 3570751 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640504484 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001188712 |
|---|
| Protein GI | 146308247 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTTG CCGAAAACCT CATCGCCTTC ACCCTGGCGG CCACCTTGCT GACCCTTACC
CCGGGCATCG ACACCGCACT GGTGCTGCGC ACCGCGGCGG TCGAAGGCCG GCGACAGGCG
TTTCGCGCGG CGCTGGGCAT CAATACCGGC TGCCTGCTCT GGGGCGCTGC CGTGGCCTTC
GGTCTGGGCG CGCTGCTGGC GGTGTCCGAG TTCGGCTACA ACCTGCTCAA GTACTGCGGC
GCGGCTTATC TGGCCTGGCT CGGGCTGAAC ATGCTGCTGC GCCCGCACAC CTCCCTGGCT
CCGGCGCAGG CCAGCGGCCA GCCCGGTGCC AACTGGTTCC TGCGCGGCCT GCTGGGCAAC
GTGCTCAATC CCAAGGTGGG GATTTTCTAC CTGTCCTTTC TGCCGCAGTT CATCCCGCAG
GGGCAGCCGC TGATCGCCTG GACCTTCGGC CTGGTGGGCA TCCACGTGGC GCTCAGCCTG
GTCTGGGCGG CGCTGCTGAT CGGCGCCACC CAGCCGCTCG GTCGCTGGTT GCGGCGCGAG
GCGGTGATCA GGTGGATGGA TCGCAGCACG GGGCTGATCT TCCTGCTGTT CGCCGCGCGC
CTGGCATTGA GCAGGCGCTG A
|
|---|
| Protein sequence | MPFAENLIAF TLAATLLTLT PGIDTALVLR TAAVEGRRQA FRAALGINTG CLLWGAAVAF
GLGALLAVSE FGYNLLKYCG AAYLAWLGLN MLLRPHTSLA PAQASGQPGA NWFLRGLLGN
VLNPKVGIFY LSFLPQFIPQ GQPLIAWTFG LVGIHVALSL VWAALLIGAT QPLGRWLRRE
AVIRWMDRST GLIFLLFAAR LALSRR
|
|---|
| |