Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3218 |
Symbol | |
ID | 5106547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3559506 |
End bp | 3561161 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640504475 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001188703 |
Protein GI | 146308238 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.359634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.412717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCTC GTAGCCCTCG CTTCTCCACC CGTGCGGTGC TCTACGCCAG CTATGCCTGT CTGCTGGCCC TGATGCTGCT GATCGCCGGC GTCTCCCTGT ACAACCTGGC GGCAGCCGAT CGGGAGTTTT CCGACTACAT CAACGGTGTG GAGGCGCGCG CGCGTCTGGC CAGCCAGGTC AGCGAGGCCG TCAAAGACAG GGCGATCGCC CTGCGCAATC TGGCGCTCAA CGCCGAGCCG GCAGCGCGAG GGCAGTATCG AGCGTCCATC GCCGCACATG AAAAGAACGT GGTGGACAGC CTCGCCAGGC TGCGTGAGGC GATGCTCACC CACAAGGACG TTTCGGCGAC GGGACGCGAG ATGCTCGCCC GTATCGAACA GGTCGAGGCG CGTTACAGCC CGGTGGCCGG CACCATCGCC GAGCACCTGT TCAAGGGCGA GGATGCGCAA GCCATGCGCA TGGTCAGCGA GCAGTGCACG CCACTGCTCG AGGAGCTGAC GCGAGTGATC AACGAGTACC TGGTACACAC CACCGACGTG GCCGACCAGC GCGTCATCGA CAACGAGACC CAGTACCACC GCCAGCGCAA CGTGCTGGTG ATGATCACCG TGCTCACGTT CGCACTGGCT GCCGTGCTGG GGCACCTGAT CAGCCGCCAT CTGCTCAAGG CCCTGGGCGC CGAGCCGAGC GACCTCAACC GCATCGCCCA GCGCGTCGCC GAAGGCGATC TGCGCACCAT GGAAAAGGCC GTGGACATCG CCGAGAACAG TGTGCTCGCC GCACTGCAGC GCATGCAGCA GAACCTGCGC CAGGTCACCC AGGATATCGA CAATTCGTCG CGCACCGTGG CGCACTCCAG TCAGGAGCTG AGCGAGTCGA GCCTGCGCAA CGCTGCCAGC GTCGCCAACG CCCAGCGGGA GGTGGAACAG ATAGTCACCG CCGTGCACGA GATGGCGGCG ACGGTGCAGG ACGTGGCACG CAGTGCGGAG TCCGCCGCGC AGGCCGCCAG CGAAGCGGAT GAGGCTGCCC TGCACAGCCA GCGCAAGGCC GGCCATGCGG TGAGCCTGAT CGGCGAGCTG GCCGAGGTGA TCGACAACTC CAGCGAAGCC ATGGGGCGCT TGAAGACCGA GAGCAGCAAC ATCGGCAGCG TGCTCGACGT CATCAAGTCG GTGGCCGATC AGACCAACCT GCTGGCGCTC AATGCGGCCA TCGAAGCGGC GCGGGCCGGC GAGGCCGGGC GTGGGTTCGC CGTGGTGGCG GACGAGGTGC GCAGCCTGGC GCGGCGGACC CAGGAGGCCA CGACCGAAAT CGAGGGGCTG ATCGCCAGCC TGCAGAAGAT CGCCGACGAA ACCTCGGCCT ACATGCAACG CTGCCAGAGC TCCAGTGCCC AGTCGGTATC CGGCGTGTCC GAGGCCGGGG AGGCGGTGGC GCGCATCGTC GCCATGATCG AGCGCATCAA CGGCATGAAC CAGCAGATCG CCACCGCTTC GGAGCAACAG AGCGCAGTGG CCGAGCAGAT CAGCCGGGGC ATCGTCTCGG TGCGCGACAG CACCGAGCAA TCCGCTTGCG CCTTTCAGAG CGCGCAGCAG GAAAGCGAAA GCCTGGCGCG CACCAGCGAG GCGCTACGGG AGAATATCTC GCGCTTTCGT CTGTAA
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Protein sequence | MQSRSPRFST RAVLYASYAC LLALMLLIAG VSLYNLAAAD REFSDYINGV EARARLASQV SEAVKDRAIA LRNLALNAEP AARGQYRASI AAHEKNVVDS LARLREAMLT HKDVSATGRE MLARIEQVEA RYSPVAGTIA EHLFKGEDAQ AMRMVSEQCT PLLEELTRVI NEYLVHTTDV ADQRVIDNET QYHRQRNVLV MITVLTFALA AVLGHLISRH LLKALGAEPS DLNRIAQRVA EGDLRTMEKA VDIAENSVLA ALQRMQQNLR QVTQDIDNSS RTVAHSSQEL SESSLRNAAS VANAQREVEQ IVTAVHEMAA TVQDVARSAE SAAQAASEAD EAALHSQRKA GHAVSLIGEL AEVIDNSSEA MGRLKTESSN IGSVLDVIKS VADQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRSLARRT QEATTEIEGL IASLQKIADE TSAYMQRCQS SSAQSVSGVS EAGEAVARIV AMIERINGMN QQIATASEQQ SAVAEQISRG IVSVRDSTEQ SACAFQSAQQ ESESLARTSE ALRENISRFR L
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