| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3213 |
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| Symbol | |
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| ID | 5106542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3552906 |
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| End bp | 3553790 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504470 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001188698 |
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| Protein GI | 146308233 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.772963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.565798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGAA TTGAGTGGGA AAGCCAGCGG GTGTTCCTCG CGGTACTTCG ATCGGGAAGC
CTGTCCGGTG CCTCGCGGCT CCTGGGCATA GCCCAATCCA CGGCCCGCCG GCGACTAGAG
AGCCTCGAGG GCTCGCTCGG ACTTAGCCTG TTCACTCGTA CTTCAACCGG CCTGACGCCC
ACTGCCTCTG CACGCCGACT CATTCATCAC GTGGAGTCGA TGGATATCGC GGCACAGGCG
TTCAATCGCA TGGCCAGCTC GGAGACGGAG GTTTCCCGAG GCACCATCAG AATAACGAGC
AGTGACCTGT TGGGGGTCGA GGTGATGCCA CGGCTGTTGC GTGACTTCCA CCATGACCAT
CCTGACCTGA ACCTCCAGCT GAGCATCAAC GATCAGATGG AAGATCTTGC CCGGCAGGAG
TCGGACATCG CGGTGCGCCT GGTGCGCCCC AGCGAAGCTG GCGTTGTCGT CCGCCGAACC
GGTGCCTTAC GTGTTGGGCT TTATGCCAGC GCCGAGTGCC TGGCGCGCTA CGAGCTGCCT
GCCAGTCTCG CCGTCTTGAG GCAGGCTCCG CTGATCGGCC CTGATCGACG CACTGCCGAT
CTGCGTCGAC TGGTCGAGCT AGGTTTTTGC GAAGCAGACC AGCGCTTTGC AATCGCCACC
GACAACCATC TCGCACAGCT CGCAGCGATC CGTGCCGGTC TGGGCTTTGG CCTGTGCCCG
GTCACTATCG CCGAGAACTA CCAATTGATC CGGGTTCTGC CGGAAAGCTT CGGCTTCGAG
ATAGACGTAT GGATTGCCAT GCATTCCGAC CTTCGCAGGA TCAGTCGCAT TTCGCGAACG
TTCGAGGCTC TCGGCCACGC CTTGCATATG GCGCTGACCA AATAG
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| Protein sequence | MNGIEWESQR VFLAVLRSGS LSGASRLLGI AQSTARRRLE SLEGSLGLSL FTRTSTGLTP
TASARRLIHH VESMDIAAQA FNRMASSETE VSRGTIRITS SDLLGVEVMP RLLRDFHHDH
PDLNLQLSIN DQMEDLARQE SDIAVRLVRP SEAGVVVRRT GALRVGLYAS AECLARYELP
ASLAVLRQAP LIGPDRRTAD LRRLVELGFC EADQRFAIAT DNHLAQLAAI RAGLGFGLCP
VTIAENYQLI RVLPESFGFE IDVWIAMHSD LRRISRISRT FEALGHALHM ALTK
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