Gene Pmen_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3181 
Symbol 
ID5106510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3517890 
End bp3518798 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID640504437 
ProductFHA domain-containing protein 
Protein accessionYP_001188666 
Protein GI146308201 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.999719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.141986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGAC TGCAGTTCCT GGATAACCGC CAAGCGCCGG TCTGGCTGAC CGACGAGCGC 
CTGACCATCG GCCAGGACAG CCGCAACCAG CTGGTGCTCG GCGATGCCGG GATCGCCAGC
TTCCACGCCG AGATCCGCCA GGACCACGGC TACTACTACC TCAGCGACAC CGGTCAGGGC
GCCACCTGGG TCAACGACCA GCGCGTCGGT ACGCGCTTTC AGCTGCGCGA CGGGGATCGC
CTGCGTCTGG GCGCCGTCGA GCTGCTGCTG GTCGACCCGG CGAAAAGCGC AGCCAGGCCG
GAAGCCGCCG CGCCGCGCTG GTTTCTCCAG GTGATCCAGG GCGAACATCA GGGGCGCAAG
TTCCATGTCC ACGGCTCGAT GACCTTCGGC CGCTCGAGCA AGTGCGAGCT GTGTTTCAGC
GATCTGGAGC TGTCGCGCCG GCATTGCGAG TTCTTCCTCA AGGACGACGT GCTGGAGGTC
AAGGATCTCG CCTCGGCCAA CGGCGTGATG GTCAACCAGC AGAAGGTCAG GACCGCCGTG
CTGCAACCGG GCGATCAGCT GAAGATGGGC TCGGTTACGC TGCTGGTGAT CGGGCCGAAG
GTGAGTGTGA GCGAGGCGCC CGACGAGGAT GCCACCCAGT TCATGCGCGT GAGCGACCTG
CCGCCCGCGC TGGCCGCCAA TGCGGCTGGC GGCGGCGCCA CGCAGATCGC CCCGGTACCG
CAGGCGGCGC GCACCAGCAC CAAGGCAGCA CCGGCGGCGG CCAATCCGCT GCGCGTTGCG
GCCCAGGCCA AGGCTGCCCC GGTTGCCGCG CCGCCTGCGG CCAGCGCGGG CAAGCTGTGG
CTGGGCGGCG TCGTATTGCT GCTGATCGGC GTGGGGCTTG GCGCCGTCGC GATGCGCTTG
TTGGGGTGA
 
Protein sequence
MLRLQFLDNR QAPVWLTDER LTIGQDSRNQ LVLGDAGIAS FHAEIRQDHG YYYLSDTGQG 
ATWVNDQRVG TRFQLRDGDR LRLGAVELLL VDPAKSAARP EAAAPRWFLQ VIQGEHQGRK
FHVHGSMTFG RSSKCELCFS DLELSRRHCE FFLKDDVLEV KDLASANGVM VNQQKVRTAV
LQPGDQLKMG SVTLLVIGPK VSVSEAPDED ATQFMRVSDL PPALAANAAG GGATQIAPVP
QAARTSTKAA PAAANPLRVA AQAKAAPVAA PPAASAGKLW LGGVVLLLIG VGLGAVAMRL
LG