Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3151 |
Symbol | |
ID | 5106480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3489275 |
End bp | 3492181 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504407 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_001188636 |
Protein GI | 146308171 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.474699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACCG ACACCACTCG CGAGAACCCG CAGGCCGTGG CGCCGCAGGG CGCCGATTCC TCCCAGGATC TGGCGGCCAC CGCCCCCGGC CAGCTGCGCG TGATCAAGCG CAACGGCACT GTCGTCCCCT ACACCGATGA CAAGATCACC GTCGCCATCA CCAAAGCGTT CCTCGCCGTG GAGGGCGGTA CCGCCGCCGC CTCGTCGCGT ATCCATGACA CCGTCGCGCG CCTGACCGAG CAGGTCACCG CCACCTTCAA GCGCCGCATG CCGTCCGGCG GCACCATCCA TATCGAAGAG ATCCAGGACC AGGTCGAACT GGCCCTGATG CGCGCCGGCG AGCAGAAAGT CGCCCGCGAC TACGTGATCT ACCGCGAAGC CCAGGCCAAC AAGCGCAAGG CCAGTGCCGG CAGCGAAATC GCCCAGCCGC ACCCGAGCAT CCGCATCACC GCCGCCGACG GCAGCCTGCA GCCGCTGGAC ATGGGCCGCC TGCAGACCAT CATCCGCGAA GCCTGCGAAG GCCTGGCCGA AGTGGACGGC GCGCTGATCG AGCGTGAAAC CCTGAAGAAC CTGTACGACG GCGTGGCCGA GAAGGACGTC AACACCGCCC TGGTGATGAC CGCCCGTACC CTGGTCGAGC GCGAGCCGAA CTACAGCTAC GTCACCGCCC GCCTGCTGAT GGACAACATC CGCGCCGAGG CCCTGACCTT CCTGGGCATC ACCCAGAGCG CCACCCACCA CGAGATGGTC GACCTGTACG CCAAGGCCCT GCCGGCCTAC GTCGACAAGG GCGTGGAGTT CGAGCTGCTC GATCCCAAGC TGAAAGAGTA CGACCTGGAG AAGCTGGGCA AGGCGCTGAA CCACGAGCGC GACCAGCAGT TCACCTACCT GGGCCTGCAG ACTCTGTACG ACCGTTACTT CATCCACAAG GACGGCATCC GCTTCGAACT GCCGCAGGTA TTCTTCATGC GCGTGGCCAT GGGCCTGGCC ATCGAAGAGC CGAAGAACCG CGAAGACCGC GCCATCGAGT TCTACAACCT GCTGTCCTCG TTCGACTACA TGGCGTCGAC CCCGACCCTG TTCAACGCCG GCACCCTGCG TCCGCAGCTG TCGTCCTGCT ACCTGACCAC CGTGCCGGAC GACCTGTCGG GCATCTACAG CGCCATCCAC GACAACGCCA TGCTGAGCAA ATTCGCTGGC GGTCTGGGCA ACGACTGGAC CCCGGTGCGC GCGCTGGGCT CCTACATCAA GGGCACCAAC GGCAAATCCC AGGGCGTCGT GCCCTTCCTC AAGGTGGTCA ACGACACCGC CGTGGCGGTC AACCAGGGCG GCAAGCGCAA GGGCGCGGTC TGCGCCTACC TGGAAACCTG GCACATGGAC ATCGAGGAAT TCCTCGAGCT GCGCAAGAAC ACCGGTGACG ACCGTCGTCG TACCCACGAC ATGAACACCG CCAACTGGAT TCCGGACCTG TTCATGAAGC GCGTCTTCGA AGACGGCAAG TGGACCCTGT TCTCCCCAAG CGAAGTGCCG GACCTGCACG ACCTGACCGG CAAGGCCTTC GAAGAGCGCT ACGAGTACTA CGAAGCCCTG ATCGAGTACG GCAAGATCAA GCTGTACAAG ACCATCCAGG CCAAGGACCT GTGGCGCAAG ATGCTCTCGA TGCTGTTCGA GACCGGCCAC CCCTGGCTGA CCTTCAAGGA CCCGTGCAAC CTGCGCAGCC CGCAGCAGCA CGTGGGCGTG GTGCACAGCT CCAACCTGTG CACCGAGATC ACCCTGAACA CCAACAAGGA CGAGATCGCC GTCTGCAACC TGGGCTCGGT CAACCTGGTC AACCACATCG TCGACGGCAA GCTGGACATC GAGAAACTCG GCCGCACCGT GAAGACCGCC GTGCGCATGC TCGATAACGT CATCGACATC AACTACTACA GCGTGCCGCA GGCGCGTAAC TCCAACCTCA AGCACCGTCC GGTCGGCCTC GGCCTGATGG GCTTCCAGGA CGCCCTGTAC CTGCAGCACA TCGCCTACGG CTCCGACGCG GCCATCGAGT TCGCCGACCG CTCCATGGAA GCCATCAGCT ACTACGCCAT CCAGGCCTCC TGTGACCTGG CCGAAGAGCG CGGCGCCTAC AGCACCTTCG AAGGCTCGCT GTGGAGCAAG GGCATCCTGC CGCTGGATTC GCAGCAGATC CTGATCGAAG CCCGTGGCCA GAAGTACATC GACGTCGACC TGTCCGAGTC GCTGGACTGG GCGCCGCTGC GCGAGCGCGT GAAGAAAGGC ATTCGCAACT CGAACATCAT GGCCATCGCG CCGACCGCGA CCATCTCCAA CATCATTGGC GTGTCGCAGT CCATCGAGCC GACCTACCAG AACCTGTACG TGAAATCGAA CCTCTCCGGC GAATTCACCG TGATCAACCC CTACCTGGTG CGCGACCTGA AGAACCGCGG CCTGTGGGAC CCGGTCATGG TCAACGACCT GAAGTACTAC GACGGCTCCG TGCAGCAGAT CGAGCGCATC CCGCAGGACC TGAAAGACCT GTACGCCACC GCCTTCGAAG TGGAAACCAA GTGGATCGTC GACGCTGCCA GCCGTCGCCA GAAGTGGATC GACCAGGCGC AGTCGCTGAA CCTGTACATC GCCGGCGCCT CGGGCAAGAA GCTGGATGTG ACCTACCGCA TGGCCTGGTA CCGTGGCCTG AAAACCACCT ACTACCTCCG TGCCCTGGCC GCCACCAGCA CCGAGAAGTC CACCATCAAC ACCGGCAAGC TGAACGCGGT TTCCGCCGGT GGTGACGAAG GCTTCTCGGC CAAGGCCCAG GCCCCTGCCC AGCAGGCCGC TCCGGCCCCG GCGCCCGTAC CAAAGGCCTG TGCCATCGAC GAACCCGACT GCGAAGCTTG TCAGTAA
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Protein sequence | MHTDTTRENP QAVAPQGADS SQDLAATAPG QLRVIKRNGT VVPYTDDKIT VAITKAFLAV EGGTAAASSR IHDTVARLTE QVTATFKRRM PSGGTIHIEE IQDQVELALM RAGEQKVARD YVIYREAQAN KRKASAGSEI AQPHPSIRIT AADGSLQPLD MGRLQTIIRE ACEGLAEVDG ALIERETLKN LYDGVAEKDV NTALVMTART LVEREPNYSY VTARLLMDNI RAEALTFLGI TQSATHHEMV DLYAKALPAY VDKGVEFELL DPKLKEYDLE KLGKALNHER DQQFTYLGLQ TLYDRYFIHK DGIRFELPQV FFMRVAMGLA IEEPKNREDR AIEFYNLLSS FDYMASTPTL FNAGTLRPQL SSCYLTTVPD DLSGIYSAIH DNAMLSKFAG GLGNDWTPVR ALGSYIKGTN GKSQGVVPFL KVVNDTAVAV NQGGKRKGAV CAYLETWHMD IEEFLELRKN TGDDRRRTHD MNTANWIPDL FMKRVFEDGK WTLFSPSEVP DLHDLTGKAF EERYEYYEAL IEYGKIKLYK TIQAKDLWRK MLSMLFETGH PWLTFKDPCN LRSPQQHVGV VHSSNLCTEI TLNTNKDEIA VCNLGSVNLV NHIVDGKLDI EKLGRTVKTA VRMLDNVIDI NYYSVPQARN SNLKHRPVGL GLMGFQDALY LQHIAYGSDA AIEFADRSME AISYYAIQAS CDLAEERGAY STFEGSLWSK GILPLDSQQI LIEARGQKYI DVDLSESLDW APLRERVKKG IRNSNIMAIA PTATISNIIG VSQSIEPTYQ NLYVKSNLSG EFTVINPYLV RDLKNRGLWD PVMVNDLKYY DGSVQQIERI PQDLKDLYAT AFEVETKWIV DAASRRQKWI DQAQSLNLYI AGASGKKLDV TYRMAWYRGL KTTYYLRALA ATSTEKSTIN TGKLNAVSAG GDEGFSAKAQ APAQQAAPAP APVPKACAID EPDCEACQ
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