Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3130 |
Symbol | malG |
ID | 5107452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3461347 |
End bp | 3462237 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504386 |
Product | maltose transporter permease |
Protein accession | YP_001188615 |
Protein GI | 146308150 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3833] ABC-type maltose transport systems, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0528646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00285167 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCGATGG TGCAACCGAA ATCCGTGAAA TACCGCCTGT GGCTGACCCA TGCCGGTCTG CTCGGCTTCA TCGCGCTGAT CGTCTTTCCG CTGCTGATGG TGGTGTCGAT CAGCTTCCGC GAAGGCAACT TCGCCACCGG CAGCCTGCTG CCGGACAACC CGACCCTGGA ACACTGGTCG CTGGCCCTCG GCATTCCCTA CCAGCATGCC GACGGCTCGG TGACCCATCC GCCGTTTCCG GTGCTGACCT GGCTGTGGAA CTCGGTGAAG ATCGCCTTCA TCAGCTCGGC GCTGATCCTG CTGCTGTCGA CCACCAGCGC CTATGCCTTC GCCCGTATGC GCTTCGCCGG CAAGGGGCCG ATCCTCAAGG GCATGCTGAT CTTCCAGATG TTCCCGCCGG TGCTGTCGCT GGTGGCCATC TACGCCCTGT TCGATCAGCT CGGCAAGCAC GCCGGCTGGC TTGGGGTGAA CAGCCACGGC GCGGTGATCG TCGCCTCGCT CGGCGGCATG GCCCTGCATA TCTGGACCAT CAAGGGCTAT TTCGAAAGCA TCGACGCCTC GCTGGAGGAG GCCGCCATCG TCGACGGCGC CACCACCTGG CAGGCCTTCG TGCACATCCT GCTGCCGATG AGCGTGCCGA TCCTCGCCGT GGTGTTCATC CTCGCCTTTA TCACCAGCAT CACCGAATAC CCCATCGCCT CGGTGCTGCT GCTGGACGTG GACAAGCTGA CCCTGTCGGT CGGCGCCCAG CAGTATCTGT ACGAGCAGAA CTACCTGTGG GGCGACTTCG CCGCTGCCGC CGTGCTCTCC GGCCTGCCGA TCACCCTGGT ATTCCTCTAT TGCCAGAAGT GGATAGTCGG TGGGCTGACC GCGGGGGGCG TGAAGGGGTA G
|
Protein sequence | MAMVQPKSVK YRLWLTHAGL LGFIALIVFP LLMVVSISFR EGNFATGSLL PDNPTLEHWS LALGIPYQHA DGSVTHPPFP VLTWLWNSVK IAFISSALIL LLSTTSAYAF ARMRFAGKGP ILKGMLIFQM FPPVLSLVAI YALFDQLGKH AGWLGVNSHG AVIVASLGGM ALHIWTIKGY FESIDASLEE AAIVDGATTW QAFVHILLPM SVPILAVVFI LAFITSITEY PIASVLLLDV DKLTLSVGAQ QYLYEQNYLW GDFAAAAVLS GLPITLVFLY CQKWIVGGLT AGGVKG
|
| |