| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3129 |
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| Symbol | |
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| ID | 5107451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3458457 |
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| End bp | 3461201 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504385 |
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| Product | transcriptional regulator MalT |
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| Protein accession | YP_001188614 |
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| Protein GI | 146308149 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0535917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00386402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCACAG CGGCCCGTCC GCCACTGCCT TTGATACCGG CCAAGCTGGC CGCGCCGTCC
ATTCATCCCG GCCTGCTGCC GCGGCCGCGC TTCGACGAGT GGCTGCAGCG TCTGCCCCAG
GTGCGCCTGG CCGTGCTGCA GGCGCCCAGC GGCTTCGGCA AGACCGTGCT GGCCAGCCAG
TGGGCCGCGG CCTTCGCCGG CGCCGTGGCC TGGCTCAACC TCGACGGCAA CGACAACAGC
CCGCGGCAGT TCGGCCGCTA CCTGCTCAAT GCCCTGCATC GCCAGCTCGA GGGCGGCTGT
CCGCAATGCG TCAATCGCGC CGAGCAGGGC GACGACGGCC TCGACGGTCT GCTCACCCGC
CTGCTCGCCG AACTGCCGGC CGAGCACCCG CCGCTGTTGC TGGTGCTCGA CGAGTTCGAG
GCGCTGCGCA ACCGCGAGGT GATCGCCGCG CTGCGCTTCT TCCTGCGCAA CACGCCGCCC
TGGCTGACCC TGCTGGTGTG CAGCCGCGGC CTGCCGGACC TGGGCGTGGC CGAGCTGCGG
GTCAAGCGTC AGCTGCTGGC GCTGGACGCC AGCCACCTGG CCTTCGAGCT GGACGAGGTG
CAGTCGCTGC TCGAACTGGG CCTGCCGATT GCCATCAACC GCGAGCAGGT CGAGCGCCTC
AACCGGCGCA TCGGCGGCTG GCCCTGCGCG CTGCAGCTGA CCCTGCAGGA GGTGCAGACC
GGGCGTGGCA TGGACCTGTT TCTCGAGGCG CTGCAACTCG GCCATCCCTA CGTGCGCGAC
TATTTCCGCG AGCAGGTGCT CTACGGCCTG GACGGCGCCA CCCAGGATTT TCTGCAGTCC
ACCTGCCTGC TCGAGCGCTT CAGCGCGCCG CTGGCCGACC GCCTGACCGA CAGCTGCAAC
GGCCGCGAGA TGCTTGAGAC CCTGGAGCGC GCCGGCCTGT TTATCCAGGC GGTGGACCCG
CTGCGTCAGT GGTTTGCCTA CCACCCGCTG TTCGCCAGCT TCCTGCGCAA CGAGCTGTCC
ACCCATCATC CGCAGCGCAT GGGCGAACTG CACCTGCGCG CCGCCGAGGC GCTGCTCGAG
GAGAAGATGG CCGAGGAGGC CGCCCGCCAT GCGCTGCTGG CGCATGATCC GCAGCGAGTG
GCGCAGATTC TCGAGACCCA CGGCCGTCAC TTCTATCGCC AGGGGCGGCT GGAGCTGCTG
CAGCGCTGCC TGGCCGTGCT GCCGGAGAGC CGCGTGGCCG AGTCGCCGCT GTTCACCCTG
TTGCAGGCCT GGGCCTCGCA GAACCAGTAC CAGAGCGATC AGGTCGAGCG CTGGCTGCAG
GCCGGCGAGG CGGTGCAGCG CGAGCAGTTC AGTGCCGAGC AGTGGCAGCG CATCGAGGGC
GAGTACCAGG CGGTGCGCGC CCAGGTGGCG ATCAACCAGG GCGACCAGCA GCGTGCCATG
GCCTTCGCCC GCCAGGCGCT GGCGCTCGAG CCGCTGACCA TGCGCACCTC GCGGGTGGCG
GCGCTGTCGG TGCTGGCCGA GTCGCACTTC GTCCAGGGCG ATCTGGCCAA GGCCCAGCAT
CAGCACGAGG AAAACGTGCG CCGCGCGCAG CAGATCAACG CCTCGCACCC GGTGCTATGG
AGCCTCGGCC AGCTGTCGGA GATCGCCGTC GCCCAGGGCC ACCTGCAGAA AGCCTACAAC
CTGCAGGAAC GGGCACTGCA GTACATCGAG CAGGAGAAGC TGCCGGTCAC CCCGATCATG
GAGTTCATCC ACCGCGTGCG CGGCCAGGTG CTGCTGGAGT GGCACCACCT CGATGCCGCC
GAGCAGTGCG CCCTGCAGGG GCTGGAGATA CTCGATACGG TGGGCGACCA CTGGTTCCTG
CAGTGCTACG TGCTGCTCGC CCGCGTCGCC CATGCGCGCG GCCAGCAGAG CCAGTGCGCC
GACTACATCG GAAGGCTCAA GACCCTGCTG GCCGGCGACG ACTACCACAT CGACTGGCAG
GCCAACGCCC ACGCGGTGAT GCTCACCTAC TGGGACTCGA CCCAGGACAA GGACAGCATC
CGCCAGTGGC TTGCCACCGC GCCGCCGCTC AAGCCGGGGG CCAACCACTT CGCCCAGGGC
AACGCGCGCA ACCATGTGCG CGCCTACCTG GCGCTGAACC AGGGCGACCG CGCGCTGCCG
ATCCTGCGTC AGCTGCAGCT CGATGCCGAG CGCCACCAGC TGGTGATGGA CCAGAACCGC
AACCATATCC TCCAGGCACT GGCCTACTGG CAGCGCGAGG AACGCCAGAG CAGTCTCGAC
CATCTGCACC AGGCGCTGAC CCTGGCCAGC GGTACCGGCG CCATCGGCAG CTTCCTGCGC
CTGGGCAAGC CGCTGATCGC CATGCTCAAG GCGCTGCAGC ACGAGCGTCG CCTCGACGAG
CTGGAACACC AGCGCGCCGA GCGCCTGATC CAGCTGGCCC AGCAGCAGCG CGACTTCAGC
CGGGCGATCC GCATCACCCT GGACGAGGCG GTGATCCAGG ACATCATCAA CCGCCCCGAC
GTACCCGAGC TGATCCGCCA TTCGCCGCTG ACCCGGCGCG AATGGCAGGT GCTCAGCCTG
ATTCACGCCG GGCTGTCCAA CGAGCAGATC TCCGAACACC TCAACGTCGC CCCGACCACC
ATCAAGACGC ACATCCGCAG CCTCTACCAG AAGCTCGCCA TCACCCAGCG CAGCGAAGCG
GTGCAGCTGG CGCGCAGCCT GTTGAGCAAG ATCCAGGGCG AGTAG
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| Protein sequence | MTTAARPPLP LIPAKLAAPS IHPGLLPRPR FDEWLQRLPQ VRLAVLQAPS GFGKTVLASQ
WAAAFAGAVA WLNLDGNDNS PRQFGRYLLN ALHRQLEGGC PQCVNRAEQG DDGLDGLLTR
LLAELPAEHP PLLLVLDEFE ALRNREVIAA LRFFLRNTPP WLTLLVCSRG LPDLGVAELR
VKRQLLALDA SHLAFELDEV QSLLELGLPI AINREQVERL NRRIGGWPCA LQLTLQEVQT
GRGMDLFLEA LQLGHPYVRD YFREQVLYGL DGATQDFLQS TCLLERFSAP LADRLTDSCN
GREMLETLER AGLFIQAVDP LRQWFAYHPL FASFLRNELS THHPQRMGEL HLRAAEALLE
EKMAEEAARH ALLAHDPQRV AQILETHGRH FYRQGRLELL QRCLAVLPES RVAESPLFTL
LQAWASQNQY QSDQVERWLQ AGEAVQREQF SAEQWQRIEG EYQAVRAQVA INQGDQQRAM
AFARQALALE PLTMRTSRVA ALSVLAESHF VQGDLAKAQH QHEENVRRAQ QINASHPVLW
SLGQLSEIAV AQGHLQKAYN LQERALQYIE QEKLPVTPIM EFIHRVRGQV LLEWHHLDAA
EQCALQGLEI LDTVGDHWFL QCYVLLARVA HARGQQSQCA DYIGRLKTLL AGDDYHIDWQ
ANAHAVMLTY WDSTQDKDSI RQWLATAPPL KPGANHFAQG NARNHVRAYL ALNQGDRALP
ILRQLQLDAE RHQLVMDQNR NHILQALAYW QREERQSSLD HLHQALTLAS GTGAIGSFLR
LGKPLIAMLK ALQHERRLDE LEHQRAERLI QLAQQQRDFS RAIRITLDEA VIQDIINRPD
VPELIRHSPL TRREWQVLSL IHAGLSNEQI SEHLNVAPTT IKTHIRSLYQ KLAITQRSEA
VQLARSLLSK IQGE
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