| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3114 |
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| Symbol | |
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| ID | 5107436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3440865 |
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| End bp | 3442061 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640504370 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_001188599 |
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| Protein GI | 146308134 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.384285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCATT TCGCTAGCGT CGCCCGGGTG CCGGGCGACC CGATCCTGAG CCTGATGGAA
GCCTATCGCC AGGACCGCAA CGCGGCCAAG CTGGACCTGG GCGTCGGCGT GTACAAGGAC
GCCCAGGGCC TGACGCCGAT TCCCCGTGCG GTCAAGCTGG CCGAGCAGCG TCTGATCGAC
AGCGAGCTGA CCAAGACCTA CGTCGGCGGC CATGGCGATG CGGCCTTCGC CGAACGCCTC
AGCCAGTTGG TGCTGGGCGC GGACTCGCCG CTGCTGGCCA GCCAGCGCGC CGCCGCCACG
CAGACGCCCG GCGGCACCGG CGCCCTGCGC CTGGCCGGCG ACTTCATCCG CCACTGCCTG
CCGGGACGCG GCATCTGGCT GAGCGACCCG ACCTGGCCGA TCCACGAAAC GCTGTTCGCC
GAGGCCGGCC TCAAGGTCGG CCATTACCCC TACGTCGGCG CCGACAACCG CCTCGACGTG
GAGGCGATGA TCGCCGCGCT GACCCACCTG CCCAAGGGCG ATGTGGTGCT GCTGCATGCC
TGCTGCCACA ACCCCACCGG CTTCGACCTC GGCCCGCGCG ATTTCAAGCG CGTGCTGGAG
GTGATCAAGG CGCGCGAGCT GCTGCCCCTG ATCGACTTCG CCTACCAGGG CTTCGGCGAC
GGCCTGGAGC AGGACGCCTG GGCGGTACGC CTGTTCGCCG CCGAGCTGCC GGAGCTGCTG
ATCACCAGCT CCTGCTCGAA GAACTTCGGC CTGTACCGCG AGCGCACCGG CGCGCTGATC
GTCTGCGCCG GCGATGCCGA CAAGCTCGTC GATATCCGCA GCCAGCTGGC CTACCTCGCC
CGTAACCTGT GGTCGACGCC GCCGGCCCAC GGCGCCGCGG TGGTCGCCGA GATTCTCGGC
GACGCCGAGC TCAGGAAGCT GTGGCAGGAC GAACTGGAGA GCATGCGCCT GCGCGTCGCC
AGTCTGCGTC GCGGCCTGGT CGAGGCGCTG GCACCGCACG GGCTGAGCGA GCGTTTCGCG
CATATCGCCG AACAGCGCGG CATGTTCTCC TACACCGGCC TGACGCCCGT GCAGGTGCAG
CGCCTGCGCG AGGACTTCAG CGTCTACATG GTCGGCAGCG GCCGCGCCAA CGTCGCCGGG
CTGGACGCCA CCCGCCTGGA GCAACTGGCC GCCGCCATCG CCCGGGTCTG CGGCTAG
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| Protein sequence | MSHFASVARV PGDPILSLME AYRQDRNAAK LDLGVGVYKD AQGLTPIPRA VKLAEQRLID
SELTKTYVGG HGDAAFAERL SQLVLGADSP LLASQRAAAT QTPGGTGALR LAGDFIRHCL
PGRGIWLSDP TWPIHETLFA EAGLKVGHYP YVGADNRLDV EAMIAALTHL PKGDVVLLHA
CCHNPTGFDL GPRDFKRVLE VIKARELLPL IDFAYQGFGD GLEQDAWAVR LFAAELPELL
ITSSCSKNFG LYRERTGALI VCAGDADKLV DIRSQLAYLA RNLWSTPPAH GAAVVAEILG
DAELRKLWQD ELESMRLRVA SLRRGLVEAL APHGLSERFA HIAEQRGMFS YTGLTPVQVQ
RLREDFSVYM VGSGRANVAG LDATRLEQLA AAIARVCG
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