| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3101 |
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| Symbol | |
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| ID | 5107424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3428704 |
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| End bp | 3430482 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504358 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001188587 |
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| Protein GI | 146308122 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.165418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCTT ACCGTGCCCC GCTACGTGAT ATGCGCTTCG TCTTCGAAGA ACTGCTCGAT
GCCTACAATG TTCTGCAGAC CCTGCCCGAG CACGGCGAGT TCAGCGCCGA TCTGGGCGGT
GCGATTCTCG AGGAAGCCGC CAAGCTGGCC GAAAATGTTC TGGCCCCGCT CAATGGGCCC
GGCGACAAGC AAGGCTGCCA GTACGACCCG AACACCTATG CGGTGCGTAC CCCGGACGGT
TTCAAGGCGG CCTACCGGCA GTTCGCCGAG GGCGGCTGGA CGGCTCTGGC CTGTACCCCG
GAGTTCGGCG GCCAGGGCCT GCCGCACGTG CTGAACATGC TGGTCGAGGA GATGACCTGC
TCGGCCAACC TGTCGCTGGG CATGTACCCC GGCCTGACCC ACGGCGCGAT CAACGCGCTG
ACCAGCCATG GCACGCCCGA GCAGCAGGCG CAGTACCTGC CGCAGCTGAT CAGCGGCGAA
TGGACCGGCA CCATGTGCCT GACCGAACCG CAGTGCGGCA CCGACCTCGG CTTGATCCGC
ACCCGCGCCG TGCCGCAAGC CGACGGCAGT TTCGCCCTCA CCGGCACGAA GATCTGGATC
ACCGGCGGCG AGCACGATCT GGTCGACAAC ATCATTCACC TGGTGCTGGC GAAGCTGCCG
GATGCGCCGG ACAGCGTGAA GGGCATCTCG CTGTTTCTGG TGCCCAAGTT CCTGGCGGAC
GGCACGCGCA ACAGCGCCTT CTGCGGTGGC CTGGAGCACA AGATGGGCAT CAAGGGCTCG
GCCACCTGCG TGATGAACTT CGAAGGGGCC AAGGGCTGGC TGATCGGCGA ACCGAACAAG
GGCCTGAGCT GCATGTTCAC CATGATGAAC TCGGCACGCC TGATGGTGGG CATGCAGGGG
CTGGGCGTGG CCGAGAGCGC CTACCAGATC GCCCTGGGCT TTGCCCGCGA GCGCCTGCAG
AGCCGTTCGA TCGCCGGTCC GAAAGCGGCC GACAAGCCGG CCGACCCGAT CCTGGTGCAT
CCGGACGTGC GGCGCATGCT GCTGCGTCAG AAGGTGATGA TCGAGGGCTG CCGCGCCCTG
GCCTATTTCG CCGGTCTGCA GCAGGACATC GCCCACGGCG CCGAGGATGC CGAAGCGCGC
ACCCGCGCCG ACGACCTGGT GCAGCTGCTC ACCCCGGTGG TCAAGGCTTT CCTCACCGAT
GAAGGCTTCA CCTGCGCCAA CGAAGGCCTG CAGGTGCTCG GCGGCTCCGG CTTCACCGAA
GACTGGGGCA TCGAACAGCT GGTGCGCGAC AGCCGCATCA CGCGCATCTA CGAGGGCACC
AACGGCATCC AGGCGCTGGA CCTGGTGGGC CGCAAGCTGG CCCTGGGCGG CGGACGCGCG
GTGCGCGCCT TCTTCGCCCT GATCGACAGC TGGCTCAAGA GCAACGCCGA GGCCCCGCAT
GCCGCCGCCG TCACCCAGAC GTTGCGACAG CTGCAGCAGG CCTCCCTGTG GCTGGCCAGC
GAAGGCAGCA AGGATCCGGA GCAGGCGGCC GCAGCGGCAA CGCCCTACCT GCGCCTGTTC
GGCCTCACCA GCCTGGCCTG GCTGTGGGCG CAGATGGCCC AGGTGGCACG CCGGCAGCTC
GATGCCGGCA GCCCGGAAAC GCATTTCTAC ACCGCCAAGC TCAAGTCCGC CGACTTCTTC
ATGGCCCGCA TCCTGCCCGA GGCCGGAGCC CTGCTCGGCG AGATCCAGGC CGGCAAGCAA
ACCCTGATGG CCTTCTCCGA CGAGGAGTTC GCCGCCTGA
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| Protein sequence | MPSYRAPLRD MRFVFEELLD AYNVLQTLPE HGEFSADLGG AILEEAAKLA ENVLAPLNGP
GDKQGCQYDP NTYAVRTPDG FKAAYRQFAE GGWTALACTP EFGGQGLPHV LNMLVEEMTC
SANLSLGMYP GLTHGAINAL TSHGTPEQQA QYLPQLISGE WTGTMCLTEP QCGTDLGLIR
TRAVPQADGS FALTGTKIWI TGGEHDLVDN IIHLVLAKLP DAPDSVKGIS LFLVPKFLAD
GTRNSAFCGG LEHKMGIKGS ATCVMNFEGA KGWLIGEPNK GLSCMFTMMN SARLMVGMQG
LGVAESAYQI ALGFARERLQ SRSIAGPKAA DKPADPILVH PDVRRMLLRQ KVMIEGCRAL
AYFAGLQQDI AHGAEDAEAR TRADDLVQLL TPVVKAFLTD EGFTCANEGL QVLGGSGFTE
DWGIEQLVRD SRITRIYEGT NGIQALDLVG RKLALGGGRA VRAFFALIDS WLKSNAEAPH
AAAVTQTLRQ LQQASLWLAS EGSKDPEQAA AAATPYLRLF GLTSLAWLWA QMAQVARRQL
DAGSPETHFY TAKLKSADFF MARILPEAGA LLGEIQAGKQ TLMAFSDEEF AA
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