Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3099 |
Symbol | |
ID | 5107422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3426458 |
End bp | 3427387 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640504356 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001188585 |
Protein GI | 146308120 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.71594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGAC TGACGGCGGC GCAGGTGTTT GTCGAAGTGG TGCAGCGGGG CAGCCAGACG GCCGCCGCCG AGGCGCTGGA GATGTCGCGG GCAATGGTTT CGCGCTATCT GGCCGAGCTG GAGCACTGGG CGGGCGTGCG CCTGCTGCAC CGCAGCACGC GCAAGCTGAG CCTGACCGCC GCCGGTGAAC AGATGCTGCC GCAGTGTCGC GAGATGCTGG CGCTGGCCGA GAACATGCAG GCCCTCGGCC AGGGGCTGGA CGACGCGCCG CGCGGCACCC TGCGCATCAC CTGCAGCCAG TCCTTCGCCC AGGCCTGGCT GGTGCATGCG CTGCAGGAAT TCACCGAGCG CTACCCGCAG GTGAGCATCG ATCTGCTGGT GGGCAGCGAG GCGCTCAACC TGGTGGAGGC GCGTATCGAC CTGGCCCTGC GTATCACCAA CCAGCTCGAC CCCAACCTGA TCGCGCGGCG CCTGGGCGTG TGCCGCTCGG TGGTCTGCGC CAGCCCGGCC TACCTGGCGC GGCATGGTAC GCCGCAGCAT CCGCAGGAGC TCGCCCGGCA CAACTGCCTG AGCTACGCCT ACTTCGGCCG CAGCCTGTGG GAGTTCGAGC GCCAGGGCGA GGCGAGCGCG GTATCGGTAG CCGGCAGCCT CAGCGCCAAC GAGTCGATGG TGCTGCTGGA GGCGGCGCTG GCCGGTGCCG GCATCAGCCT GCAGCCGCTG TATTCGGTGG CCGGGTTGCT GCGCGAAGGG CGCCTGGTGC AGCTGCTGGC GGATTACCGG CCGGCGGAGC TGGGCATCCA CGCCCTGTAC GGCACGCGTC GGCAGATGCT GCCGGCCATG CGCCTGTTGC TGGATTTCAT CGCCGAGCGC CTGGCCGGCG AGGCGCAATG GCAAATTGAT TGCGCGGGCG GCTTGCATTC GGCCAGCTAG
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Protein sequence | MDRLTAAQVF VEVVQRGSQT AAAEALEMSR AMVSRYLAEL EHWAGVRLLH RSTRKLSLTA AGEQMLPQCR EMLALAENMQ ALGQGLDDAP RGTLRITCSQ SFAQAWLVHA LQEFTERYPQ VSIDLLVGSE ALNLVEARID LALRITNQLD PNLIARRLGV CRSVVCASPA YLARHGTPQH PQELARHNCL SYAYFGRSLW EFERQGEASA VSVAGSLSAN ESMVLLEAAL AGAGISLQPL YSVAGLLREG RLVQLLADYR PAELGIHALY GTRRQMLPAM RLLLDFIAER LAGEAQWQID CAGGLHSAS
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