Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3052 |
Symbol | tsf |
ID | 5107532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3378373 |
End bp | 3379236 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640504309 |
Product | elongation factor Ts |
Protein accession | YP_001188538 |
Protein GI | 146308073 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.204992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGA TTACTGCAGC CCTGGTTAAA GAACTGCGCG AGCGTACCGG CCAAGGCATG ATGGAATGCA AGAAGGCCCT GGTTGCCGCC GGTGGCGACA TCGAGAAAGC CATTGATGAC ATGCGCGCTT CCGGTGCCAT CAAGGCTGCC AAGAAGGCCG GCAACATCGC CGCCGAAGGC TCCATCGCTG TTCGTGTCGA AGGCGGCCGC GGCGTGATCA TCGAAGTCAA CTCGCAGACC GACTTCCTGG CCCTGCAGGA CGACTTCAAG GCGTTCGTCA AGGAAAGCAT CGACGAAGCC TTCGAGAAGA ACCTGACCGA AGCCGCTCCG CTGATCGCTT CCCGCGAGTC GGCTCGTGAA GCTCTGGTTG CCAAGTGCGG CGAGAACGTC AATATCCGTC GTCTGACCGC CGTTTCCGGT GAAACCGTCG GTGCCTACCT GCACGGCCAC CGCATCGGTG TTCTGGTCGT CCTGAAGGGC GGCAACGACG AGCTGGCCAA GCACGTTGCC ATGCACGTCG CCGCAAGCAA CCCGGCCGTG GTATCGCCGG ACCAGGTTTC CGAAGAGCTG GTTGCCAAGG AAAAGGAAAT CTTCCTGCAG CTGAACGCCG AGAAGATCGC CGGCAAGCCG GAAAACATCG TCGAGAACAT GGTCAAAGGC CGTATCGCCA AGTTCCTGGC CGAAGCCAGC CTGGTCGAGC AAGCCTTCAT CATGGATCCG GAAGTCAAGG TCGGTGACCT GGTCAAGAAA GCCGGTGCCG AAGTCGTTTC CTTCGTACGT TACGAAGTGG GCGAAGGCAT CGAGAAGGCC GAGACCGACT TCGCTGCCGA AGTCGCTGCT CAGGTTGCTG CCAGCAAGCA GTAA
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Protein sequence | MAEITAALVK ELRERTGQGM MECKKALVAA GGDIEKAIDD MRASGAIKAA KKAGNIAAEG SIAVRVEGGR GVIIEVNSQT DFLALQDDFK AFVKESIDEA FEKNLTEAAP LIASRESARE ALVAKCGENV NIRRLTAVSG ETVGAYLHGH RIGVLVVLKG GNDELAKHVA MHVAASNPAV VSPDQVSEEL VAKEKEIFLQ LNAEKIAGKP ENIVENMVKG RIAKFLAEAS LVEQAFIMDP EVKVGDLVKK AGAEVVSFVR YEVGEGIEKA ETDFAAEVAA QVAASKQ
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