| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3050 |
|---|
| Symbol | frr |
|---|
| ID | 5107530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3376892 |
|---|
| End bp | 3377449 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640504307 |
|---|
| Product | ribosome recycling factor |
|---|
| Protein accession | YP_001188536 |
|---|
| Protein GI | 146308071 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0233] Ribosome recycling factor |
|---|
| TIGRFAM ID | [TIGR00496] ribosome recycling factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.672962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACG ACATCAAGAA AGACGCTCAG GAGCGTATGG GCAAATCCCT GGAAGCGCTG
GATCGTAACC TGGCTTCCAT CCGTACCGGC CGCGCTCACC CGAGCATTCT CGACAGCGTC
AAGGTGCCGG CCTGGGGTAG CGACATGCCG CTGAATCAGG TCGCTGCGAT CACCGTTGAA
GATGCTCGTA CTCTGAAGAT CGTCGCTCAC GACAAGAACC TCAGCGCTGC CATCGAGAAG
GCCATCATGA CCTCCGATCT GGGCCTGAAC CCGAGCAGCG CCGGCACCAC CATCCGCGTG
CCGATGCCCG CGCTGACCGA GGAAACCCGC AAGGGCTACA CCAAGCAGGC GCGTGGCGTG
GCCGAAGATG CCAAGGTCGC CGTGCGCAAC GTGCGCCGCG ACGCCTTGGC CGAGCTGAAG
AAGCTGGCCA AGGCCAAGGA GATCAGTGAA GACGAAGAGC GTCGTGCTGC TGACGAGCTG
CAGAAGATCA CCGACAAGTT CATCGCTGAT GTCGACAAGG CCCTGGAGGT CAAGGAAGCG
GACCTGATGG CCGTTTGA
|
|---|
| Protein sequence | MINDIKKDAQ ERMGKSLEAL DRNLASIRTG RAHPSILDSV KVPAWGSDMP LNQVAAITVE
DARTLKIVAH DKNLSAAIEK AIMTSDLGLN PSSAGTTIRV PMPALTEETR KGYTKQARGV
AEDAKVAVRN VRRDALAELK KLAKAKEISE DEERRAADEL QKITDKFIAD VDKALEVKEA
DLMAV
|
|---|
| |