| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3036 |
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| Symbol | |
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| ID | 5107516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3359540 |
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| End bp | 3360862 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504293 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_001188522 |
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| Protein GI | 146308057 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0244601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TCACCATTCG CCTGCGCCAG GCCATGCAGC CGTGGCGCAC GGCTCCTGCC
TGGCGTATCG CCTTCTCCGG TGGCCTGGAT TCCAGCGTGC TGCTGCATCT GCTCGCCGAC
TGGGCCCAGC ACGAGGAGTT GCCGCCGCTC TCCGCCATTC ATGTCCATCA TGGCCTGCAG
CCGGCTGCCG ATGCCTGGCC TGAGCATTGC GCGCTGGTCT GCGCGCGGCT GGATATTCCA
CTGGACATCG TCAGGGCGCA GGTGGCGCCG GGGGCTAGTC TGGAGCAGGC CGCGCGGCGG
GCGCGCTATG CGGCGTTCGC TGAGCGGCTG GGCCCTGGCG AGATTTTGCT CGGTGCCCAG
CATCGCGACG ACCAGGCCGA AACCCTGCTG TTTCGCCTGC TGCGTGGGGC TGGCGTGCGC
GGCCTGGCGG CCATGCCGGT CAGCCGGTCA CTGGGTTGCG GCACTCTGCT TCGGCCCTTG
CTCGGCTGCT CGCGGGCCGA ATTGCATGCC TACGCGCAGT GCCATGGGCT GGCCTGGGTC
GAGGATCCGA GCAATGCCGA CGAGCGTTTC AGTCGCAATT TCCTGCGCAG ACAGGTGATG
CCGCTGCTGG CCGAGCGCTG GCCGCAGCTG GCTGCAAGCC TTTCACGCAG CGCCGGCCAT
CTGGGCGAGG CCCAGCAGCT GTTGGAAGAG CTGGCCGAGA TGGACCTGCT GGCTGCTCGT
GGCGTTTGCG CTTTGCCCTG GTTGCCGTTG CCTTCCCTGG ATTTGTCGGC CGTGGCCGCG
CTGAGCGATG CGCGTCAGCG CAATTTGCTG CGGCATTGGC TGGCGCCTAT GAGCCGAATG
CCCGACAGCG ACCATTGGGC CGGTTGGTAT GACCTGCGTG ATGCTGCTGC GGATGCGACG
CCGATCTGGA AACTGGCCGA TGGCGAGCTG CACAGGGCGG AGGGGCGGCT CTGGTGGCTC
AGCGGGGACT GGTTGAGGCC GCCGCAGCCG TTCGATCTAC CCTGCGGTGC GCTTGGCGAA
CCTGTCGAGC TCCCCGGCAA TGGTCGTGTG AACCTGTCTG GCGAACTGCC TCAAGGTCAC
TGGCATCTGC GTTACCGCGT CGGCGGCGAG TCGCTGCAGG TACCGGGACG TGGTCGGCGT
GATCTCAAAC GCTTGCTTAA CGAAATGCGC GTGCCTCCAT TCGTGCGCTC GCGTCTGCCG
CTGTTGTTCG ATGGCGATGA GCTGGTGGCG GTGGCGAACC TGACGCAAGC GCCAGGAATG
GCGGCGGGCG GGGTGCGTCT GCACTGGTCG CCGCCTATCG GTGATCGAGG TTTGAGCTGG
TAA
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| Protein sequence | MTDLTIRLRQ AMQPWRTAPA WRIAFSGGLD SSVLLHLLAD WAQHEELPPL SAIHVHHGLQ
PAADAWPEHC ALVCARLDIP LDIVRAQVAP GASLEQAARR ARYAAFAERL GPGEILLGAQ
HRDDQAETLL FRLLRGAGVR GLAAMPVSRS LGCGTLLRPL LGCSRAELHA YAQCHGLAWV
EDPSNADERF SRNFLRRQVM PLLAERWPQL AASLSRSAGH LGEAQQLLEE LAEMDLLAAR
GVCALPWLPL PSLDLSAVAA LSDARQRNLL RHWLAPMSRM PDSDHWAGWY DLRDAAADAT
PIWKLADGEL HRAEGRLWWL SGDWLRPPQP FDLPCGALGE PVELPGNGRV NLSGELPQGH
WHLRYRVGGE SLQVPGRGRR DLKRLLNEMR VPPFVRSRLP LLFDGDELVA VANLTQAPGM
AAGGVRLHWS PPIGDRGLSW
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