Gene Pmen_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3027 
Symbol 
ID5107507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3350744 
End bp3351586 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID640504284 
Productcarboxylesterase 
Protein accessionYP_001188513 
Protein GI146308048 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000156847 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTCG AAATCGTTTC CAGCAACAAG AGCTTCGGCG GCTGGCACAA GCGCTACCGC 
CATCGCTCCA GCAGCCTCAA CTGCGACATG GTGTTCGCCG TTTACCTGCC GCCGCAGGCC
GAGCAGGGCG CCAGGCCGCC GGTGCTGTAC TGGCTGAGCG GGCTGACCTG CACCGACGAG
AACTTCATGC AGAAAGCCGG CGCCCAGCGC ATGGCCGCCG AACTCGGGCT GATCATCGTC
GCGCCGGATA CCAGCCCGCG CGGCGAAGGG GTGGCCGACG ACGCCAATGG CGCCTATGAC
TTCGGCCTCG GCGCGGGTTT CTACGTCAAC GCCACCCAGG AGCCTTTCGC GCGCCACTAC
CGCATGTACG ACTACGTGGT GCAGGAGTTG CCAGCGCTGA TCGAGGCCAA TTTCCCGGTC
TCGGACAAGC GCGGCATCGC CGGCCACTCC ATGGGCGGGC ACGGTGCGCT GATCTGTGCG
CTGAAGAATC CGGAGCGCTA TCGCTCGGTA TCGGCTTTTG CCCCCATCAG CAACCCGATG
AACTGCCCCT GGGGCGAGAA GGCCTTTTCG CTGTACCTGG GCGAGGAGCG TTCGCGCTGG
CGCGAGTGGG ATGCCAGCGT GCTGATCGCC GAAGCCAGCG AGAAACTGCC GATCCTGGTC
GATCAGGGCG ATCGCGACGA CTTCCTCGAA GGCCAGCTCA AACCCCAGGC ATTGCAGGCT
GCCGCCAAGG CTGCCGGTCA TCCGCTGACG CTGCGCATGC AGCCGGGCTA TGACCACAGC
TACTACTTCA TCGCCAGCTT TATCGACGAG CACCTGCGTC ATCACGCCGA AGCGCTGGCG
TAG
 
Protein sequence
MTLEIVSSNK SFGGWHKRYR HRSSSLNCDM VFAVYLPPQA EQGARPPVLY WLSGLTCTDE 
NFMQKAGAQR MAAELGLIIV APDTSPRGEG VADDANGAYD FGLGAGFYVN ATQEPFARHY
RMYDYVVQEL PALIEANFPV SDKRGIAGHS MGGHGALICA LKNPERYRSV SAFAPISNPM
NCPWGEKAFS LYLGEERSRW REWDASVLIA EASEKLPILV DQGDRDDFLE GQLKPQALQA
AAKAAGHPLT LRMQPGYDHS YYFIASFIDE HLRHHAEALA