Gene Pmen_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3023 
Symbolpcm 
ID5107503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3347678 
End bp3348352 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID640504280 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_001188509 
Protein GI146308044 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value2.7014e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGGCC AGGACGATAT GCAGCGCCGC GGGATCGGCA TGACCTCGCA GCGCACCCGT 
GAGCGATTGA TTCAGCGTCT TTACGAAGAG GGGCTGTCCA ACGCGCGGGT GCTTGAGGTG
ATTCGGCGCA CGCCGCGCCA TCTGTTCGTC GACGAGGCGC TGGCGCACCG TGCCTACGAG
GACACGGCGC TGCCCATCGG GCACAACCAG ACCATTTCCC AGCCTTATAT GGTCGGCCGC
ATGACCGAGC TGCTGCTGGC TGCCGGCCCG CTGGACAAGG TGCTGGAGAT CGGCACCGGT
TCCGGCTACC AGACCGCCGT GCTGGCGCAA CTGGTGGAGC GGGTGTTCTC GGTCGAGCGG
ATCCAGGTGC TGCAGGACCG TGCCAAGGAG CGTCTGGCCG AACTCAGCCT GCGCAACGTG
GTCTTCCGCT GGGGTGATGG CTGGGAAGGT TGGAATGCGC TGGGGCCATA CAACGGCATC
ATCGTCACTG CGGCGGCGGC GCAGGTTCCG CAGGCGCTGC TCGACCAACT GGCGCCCGGT
GGCCGTCTGG TCATCCCGGT CGGCGCGGGA GATGTGCAGC AACTGCTGCT GATCGTGCGC
GAAGAGCATG GTTTTTCTCG CCATGTGCTG GATGCGGTGC GTTTCGTCCC CTTACTCAAC
GGGCCGCTGG CCTGA
 
Protein sequence
MRGQDDMQRR GIGMTSQRTR ERLIQRLYEE GLSNARVLEV IRRTPRHLFV DEALAHRAYE 
DTALPIGHNQ TISQPYMVGR MTELLLAAGP LDKVLEIGTG SGYQTAVLAQ LVERVFSVER
IQVLQDRAKE RLAELSLRNV VFRWGDGWEG WNALGPYNGI IVTAAAAQVP QALLDQLAPG
GRLVIPVGAG DVQQLLLIVR EEHGFSRHVL DAVRFVPLLN GPLA