Gene Pmen_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3019 
Symbol 
ID5107499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3343868 
End bp3344191 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content58% 
IMG OID640504276 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001188505 
Protein GI146308040 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000000147702 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTTCG TCGTTACCGA CAACTGCGTC AAATGCAAAT ACACCGACTG CGTGGAAGTC 
TGCCCGGTTG ACTGCTTCTA TGAAGGCCCG AACTTCCTGG TGATCCACCC GGACGAGTGC
ATCGACTGCG CCCTGTGTGA ACCCGAGTGC CCGGCTCAGG CGATCTTCTC CGAGGACGAA
GTGCCCGAGG ACATGCAGGA ATACATCGAG CTGAACGCCG ACCTGGCAGA AGTCTGGCCG
AACATCACCG AGAAGAAGGA AGCCCTGCCG GACGCCGAGG AATGGGATGG AGTGAAGGAC
AAGCTGCAGT ATCTGGAGCG CTGA
 
Protein sequence
MTFVVTDNCV KCKYTDCVEV CPVDCFYEGP NFLVIHPDEC IDCALCEPEC PAQAIFSEDE 
VPEDMQEYIE LNADLAEVWP NITEKKEALP DAEEWDGVKD KLQYLER