| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2993 |
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| Symbol | |
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| ID | 5107474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3314993 |
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| End bp | 3315697 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504251 |
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| Product | DNA replication initiation factor |
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| Protein accession | YP_001188480 |
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| Protein GI | 146308015 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.553291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00574523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCTA TCCAGCTGCC TCTGGGGGTG CGTCTGCGCG ATGACGCCAC CTTCGCCAAC
TACTACCCCG GCGCCAATGC CGCGGCCCTG GGCTATGTCG AGCGGCTGTG CGAGGCCGAT
GCCGGCTGGA CGGAGAGCCT CATCTATCTA TGGGGCGCCG AAGGGGTGGG GCGCAGCCAT
CTGCTGCAGG CCGCCTGCCT GCGTTTCGAG CAGCGCGGCG ATGCGGTGGT CTACCTGCCG
CTGACCGAGG TGGTGCAGCA CGGCCCAGAG CTGCTCGACA ATCTCGAGCT GTGCGAACTG
GTCTGCCTGG ACGATCTGGA TGCGGTGGCC GGGCGCAGCG ACTGGGAAGA GGGGCTGTTC
CACCTGTTCA ACCGCCTGCG CGACAGCGGC CGGCGTCTGC TGCTGGCCGG CACCATGTCG
CCGCGCGAGC TGCCGATTCA ACTGCCCGAT CTGAAGTCGC GACTGACCCT GGCGCTGGTC
TTCCAGCTGC ACGAGCTGTC CGACGAGGAC AAGCTGCGCG CCTTGCAGCT GCGCGCCTCG
CGTCGTGGCC TGCAGATGAG TGATGAGGTC GGACGCTTCA TCCTCACCCG TGGCGAGCGC
AGCATGAGTG CGCTGTTCGA GCTGCTGGAG CGTCTCGATC AGGCCTCGCT GCAGGCCCAG
CGCAAGCTGA CCATTCCCTT TCTCAAGGAA ACGCTGGGCT GGTAG
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| Protein sequence | MKPIQLPLGV RLRDDATFAN YYPGANAAAL GYVERLCEAD AGWTESLIYL WGAEGVGRSH
LLQAACLRFE QRGDAVVYLP LTEVVQHGPE LLDNLELCEL VCLDDLDAVA GRSDWEEGLF
HLFNRLRDSG RRLLLAGTMS PRELPIQLPD LKSRLTLALV FQLHELSDED KLRALQLRAS
RRGLQMSDEV GRFILTRGER SMSALFELLE RLDQASLQAQ RKLTIPFLKE TLGW
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