| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2984 |
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| Symbol | |
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| ID | 5107465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3308727 |
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| End bp | 3309185 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504242 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_001188471 |
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| Protein GI | 146308006 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00388895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0679013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTACA AGGCAGTCAT GGGTATCTGC GCCGGCCTGC TGCTGACTGG TTGCGCCGAA
GACTTCGGCC TCGACCAGCA TGGACGAAAG GTAACGGCTG ACAGCCTGGA TAGCCAGTGG
CTGATCATTA ATTATTGGGC CGAATGGTGC GCGCCGTGCC GTACCGAAAT TCCCGAGCTC
AATGCCTTGG AAGACGAGCT GAAAACGCGC TCGGCGCGAG TGCTGGGCGT CAACTTCGAC
GGACTGCAGG GCGAGGACCT CAAGCGCGCG GCGCAGGCCT TCGACATTCG CTTCACCGTG
CTCGCCGACG ACCCCGCGCC GCGCTTCGAA TTGCCGCGCA ACGACGTGCT GCCGGTGACC
TACATAGTCG ACGCCGACGG CAAGCTGCGC GAGCGCCTGG TCGGCGAGCA GACCGCCGCC
GGCCTGCTGG CGCATCTGCA GCGGCTGCGC GGCGAATAG
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| Protein sequence | MIYKAVMGIC AGLLLTGCAE DFGLDQHGRK VTADSLDSQW LIINYWAEWC APCRTEIPEL
NALEDELKTR SARVLGVNFD GLQGEDLKRA AQAFDIRFTV LADDPAPRFE LPRNDVLPVT
YIVDADGKLR ERLVGEQTAA GLLAHLQRLR GE
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